Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN73623

FASTA Sequence
Unigene ID: UN73623Length: 541 SSR 
GGACATGTTGATGGAGGAAGATATTGAAGAACAGTCTTGTATGTTGGAAGACAGTTTGGCTTTACAAGCGGCACAGAGATCTTTCT
TTGAAGTGCTTCACCAAGATCAGACTCCTCCTCCTCCTCCTCCGCCTGAACAAATCTCCGGCGATCAAGACAACTGTTCTATTGAA
AACTTCAGCTCGATAACGAGCTTATTACAGCAACCAACCTTAGGTTTCACTGAGATCTCTGAGGAATCAACAAGAAGGTACCGCCT
ACGAGGTGATGATGATGAAGAAGATGATCTCGAGAGTGAGCGGAGATCAAAGCTCCCTGCAATTTCTGCGGTGGATGAGCTAGCTG
AAAAGTTGGAGGAAGTGTTATTGGTGTGTCAAAAGAATGATCATGGGGAAGCAACACCGAACAAAACCGGACGAGCAAAGGGATCA
CTGAACCGGTCCAAGGCTCAGAAGTCAGATCAGCCAGTTGATATGCGTAATCTCTTGATGCAGTGCGCGCAAGCAGTGGCTAGCTT
TGACCAGAGCAGAGCTTTTGAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875794 scarecrow transcription factor family protein [Arabidopsis lyrata subsp. lyrata]6298e-064
NP_190244 scarecrow-like protein 30 [Arabidopsis thaliana]6082e-061
AAM64966 scarecrow-like protein [Arabidopsis thaliana]6082e-061
BAJ33797 unnamed protein product [Thellungiella halophila]6073e-061
NP_001078251 scarecrow-like protein 30 [Arabidopsis thaliana]5293e-052

Swiss-Prot top hits (Blast detail)Scoree value
Q9SNB8 Scarecrow-like protein 306081e-062
Q9LTI5 Scarecrow-like protein 113463e-032

TrEMBL top hits (Blast detail)Scoree value
A8MS63 Uncharacterized protein At3g46600.35292e-052
Q3EAP0 Uncharacterized protein At3g46600.24021e-037
B9SYB3 Putative uncharacterized protein1431e-007
B9HBM9 GRAS family transcription factor1394e-007
B9T682 Chitin-inducible gibberellin-responsive protein, putative1295e-006

Arabidopsis top hits (Blast detail)Scoree value
AT3G46600.1 scarecrow transcription factor family protein6081e-063
AT3G46600.3 scarecrow transcription factor family protein5292e-054
AT3G46600.2 scarecrow transcription factor family protein4029e-040
AT5G59450.1 scarecrow-like transcription factor 11 (SCL11)3463e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members