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Information for unigene UN73684
| FASTA Sequence |
| Unigene ID: UN73684 | Length: 709 |
SSR | | GGATCCAAAGGCATTTCCTCACATCCTTATATCTCTCTTCTTCTCTCTCTCTCTATCTTCTTCCTCTGCTTCCCGCGGAGCTTTCA
GTCTCAAAGTATGTCAGTATCTACACATTGTTTCACTTCACCCTGTCACGACCGTACGAGATTCTTCTCAAGCGACGATGGTAATA
ATAAACTTCTAAGAAAGAGAATCAAAGGCACTTTCTTGGTGAAAATCTTACCTTCTTCTTCCCAAAACTCTAATCTAAGAGTAACT
GCGAAATCTCCACCACCCTTATCTGGATTCAGGTCAGGAATCTCTAAGGGAGTATTTGATATTGTGTCATTGACATCATCGAGGAA
TGCACTCAAAGGGCTGACCGCTCCACTGGTGCTAAAGCTTGTAGGTGTTGTAGCCTGCGCGTTTCTAATAGTTCCGTCTGCTGATG
CAGTTGATGCTCTCAAGACTTGTGCCTGTTTACTAAAGGGGTGCAGGATAGAACTCGCAAAGTGCATTGCCAACCCTTCCTGTGCA
GCTAATGTCGCTTGTCTCCAGACCTGTAACAACCGTCCTGATGAAACCGAGTGCCAGATTAAATGTGGTGATCTGTTCGAGAACAG
TGTAGTCGACGAGTTCAACGAATGCGCCGTATCCAGAAAAAATGCGTTCCAAGAAAATCAGACCTCGGAGAGTTTCCAGCCCCTGA
CCCTTCTGTCCTCGTCAAGAG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_172331 Violaxanthin de-epoxidase [Arabidopsis thaliana] | 748 | 2e-077 |
| AAF22898 T27G7.23 [Arabidopsis thaliana] | 748 | 2e-077 |
| XP_002889702 non-photochemical quenching 1 [Arabidopsis lyrata subsp. lyrata] | 707 | 1e-072 |
| XP_002525473 conserved hypothetical protein [Ricinus communis] | 440 | 1e-041 |
| XP_002267152 PREDICTED: hypothetical protein [Vitis vinifera] | 434 | 6e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39249 Violaxanthin de-epoxidase, chloroplastic | 748 | 1e-078 |
| Q40251 Violaxanthin de-epoxidase, chloroplastic | 420 | 1e-040 |
| Q9SM43 Violaxanthin de-epoxidase, chloroplastic | 410 | 2e-039 |
| Q40593 Violaxanthin de-epoxidase, chloroplastic | 382 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9DGR5 AT1G08550 protein | 748 | 2e-077 |
| B9SHK4 Putative uncharacterized protein | 440 | 9e-042 |
| Q0JDT1 Os04g0379700 protein | 430 | 1e-040 |
| Q7X728 OSJNBa0083D01.25 protein | 430 | 1e-040 |
| Q945R7 Violaxanthin de-epoxidase | 430 | 1e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G08550.1 NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1); violaxanthin de-epoxidase | 748 | 1e-079 |
| AT1G08550.2 NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1); violaxanthin de-epoxidase | 748 | 1e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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