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Information for unigene UN73793
| FASTA Sequence |
| Unigene ID: UN73793 | Length: 775 |
SSR | | GGGGGGACGAGAGAGGAGGAGGAGGAGCACAGAGATCTCGCTCGTTCGTTTCCCTCCGGAAAATCAGTGAGAAAAGGAGAATTTAC
ATCGGATCCTCATTATAGAAAAATTGGACTCTCTATCTAGTCCACGAGTTTCGTTTAATCACCCAACAACGCCTCTTCCTCATTTT
CGCTTATTCGCTTTTTTTTTTCCCTAACCTCTCCCTCACAAGTTCGATTTTTGATGTTTGAAATTGAGGATCAGATCTAGTTTTTT
AGGAGATAAGGCTGTGAGAGAGATAGATTATTATTACTAATATGTATATGGATCGAGAGAGAAGGCTTTCTAATCGCAGCAACAGC
ACTACTCCTCCTGAATACACCAACCGCGACGATAATAAAAATGGTTACGGAGGAGGATTCTTCTCAGATCGATCACGCGAGAAGAG
TCCTCCTTCTAGATCGAAGATTCTTCGTATCCCGTCTCCGAACTCGTCTCCTCCGCTTTCCAGCTCTTCCTCGCCCTACCGTCGTG
GTGGTTCTAACTCCCCTGACCGTGCCGGATATATCGAGCACCGCGTCTCCAAGTTCGATACTCTCGCCGGCGTTGCCATTAAATAC
GGCGTTGAGGTTGCAGATGTGAAAAAGATGAATGGGCTTGTTACTGATCTTCAAATGTTTGCTCTCAAGTCTCTCCGGATCCCTTT
ACCTGGAAGACATCCTCCTTCTCCTTGTTTATATAACGGCTCCTTAAACCATGGAGAGGGATGTTCATGCCACGAACTGGAATCAC
A
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196437 peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] | 541 | 3e-053 |
| CAB93721 hypothetical protein [Arabidopsis thaliana] | 536 | 1e-052 |
| XP_002871312 hypothetical protein ARALYDRAFT_487656 [Arabidopsis lyrata subsp. lyrata] | 533 | 2e-052 |
| XP_002872038 hypothetical protein ARALYDRAFT_489170 [Arabidopsis lyrata subsp. lyrata] | 411 | 3e-038 |
| NP_197704 Peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] | 354 | 1e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9D7V2 LysM and putative peptidoglycan-binding domain-containing protein 2 | 130 | 6e-007 |
| Q1JQA8 LysM and putative peptidoglycan-binding domain-containing protein 2 | 122 | 5e-006 |
| Q8IV50 LysM and putative peptidoglycan-binding domain-containing protein 2 | 121 | 7e-006 |
| A0JNI1 LysM and putative peptidoglycan-binding domain-containing protein 1 | 120 | 9e-006 |
| Q3B7I8 LysM and putative peptidoglycan-binding domain-containing protein 2 | 120 | 9e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8L708 At5g08200 | 541 | 2e-053 |
| Q9LEY7 Putative uncharacterized protein T22D6_140 | 536 | 8e-053 |
| Q9FN43 Genomic DNA, chromosome 5, P1 clone:MYJ24 | 380 | 9e-035 |
| Q8VYP8 Putative uncharacterized protein At5g23130 | 354 | 1e-031 |
| B9HGL8 Predicted protein | 306 | 4e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G08200.1 peptidoglycan-binding LysM domain-containing protein | 557 | 2e-057 |
| AT5G23130.1 peptidoglycan-binding LysM domain-containing protein | 354 | 6e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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