Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN73901

FASTA Sequence
Unigene ID: UN73901Length: 614 SSR 
GGAACAAGGTAGCCATAATAACCGGAGGAGCAAGAGGGATCGGAGCTGCCACGGATAGGCTGTTTACAGAGAATGGTGCATATGTC
ATAGTCGCGGATATAATGGATGAAGAAGGCGTCCATATGACAGAATCTATTGGTGGCTGCTACGTTCATTGCGATGTGTCCAAGGA
GGCTGATGTGGAGGCGGCAGTGGAGCTAGCAATGAGACGTAAAGGGAGGCTGGACGTGATGTTCAACAATGCTGGAATGGCTGTGA
ACGAAGGTAGCATCATGGAGATGGACATTAAGATGGTTAACAAACTTGTTTCCGTCAATGTGAATGGTGTCTTGCTTGGCATCAAA
CATGCCGCCAGGGCCATGATCAAAGGAGGAGGAGGAGGGTCGATAATATGCACATCAAGTTCATCAGGGATAATGGGAGGACTTGG
AGGTCACGCATATACGCTTTCAAAGGGAGCCATTAACGGGCTCGTGAAGACAACGGCATGCGAACTTGGCTCTCACGGTATCCGTG
TGAACAGCATCTCTCCGCATGGAGTTCCCACTGACATCTTGGTCAACGCTTATCGTACCTATCTTCACAATGACAAAATCGATGCT
GCTGAAGTGACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875592 alcohol dehydrogenase [Arabidopsis lyrata subsp. lyrata]9561e-101
AAM63311 alcohol dehydrogenase (ATA1) [Arabidopsis thaliana]9183e-097
AAC49835 alcohol dehydrogenase [Arabidopsis thaliana]9131e-096
NP_189882 protein TAPETUM 1 [Arabidopsis thaliana]9131e-096
XP_002312493 predicted protein [Populus trichocarpa]6622e-067

Swiss-Prot top hits (Blast detail)Scoree value
P50160 Sex determination protein tasselseed-24324e-042
Q7FAE1 Momilactone A synthase4092e-039
P69166 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase3383e-031
P69167 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase3383e-031
P46331 Uncharacterized oxidoreductase yxbG2802e-024

TrEMBL top hits (Blast detail)Scoree value
Q8LDB0 Alcohol dehydrogenase (ATA1)9182e-097
O24452 Alcohol dehydrogenase9139e-097
Q9M1K9 Alcohol dehydrogenase (ATA1)9139e-097
B9HJM3 Predicted protein (Fragment)6621e-067
B9S7B8 Short chain alcohol dehydrogenase, putative6611e-067

Arabidopsis top hits (Blast detail)Scoree value
AT3G42960.1 ATA1 (ARABIDOPSIS TAPETUM 1); binding / catalytic/ oxidoreductase9136e-099
AT3G26760.1 short-chain dehydrogenase/reductase (SDR) family protein4541e-045
AT3G29250.1 copper ion binding / oxidoreductase4404e-044
AT3G29250.2 oxidoreductase4404e-044
AT3G29260.1 short-chain dehydrogenase/reductase (SDR) family protein4361e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members