 |
Information for unigene UN74217
| FASTA Sequence |
| Unigene ID: UN74217 | Length: 594 |
SSR | | GTTTGTGGACAACATTGGCATAGTGTTCAAAATTCAGATCATCACATCTACGAAACTATAAATAAAAAGAGAGAGAGAGAGGATCT
CACATGAACAGAGCTGAAAATGTGTAAGTTTGAGGTTATCTTTTGCCATCATTCTCCATCCCATTTGTCATTAGGGATCTCTCCAG
AATCAGCAATCACAACTTTCTTCCTTGGTTTGCCACTGTAAGTACCAGCTCCACCTTCAATGGCGAACACATAGTCCATCCCTTGT
ATCACCTTCCCGAACACAACATGTTCCCCTTCCAACCAGGTAGCCTTGACAGTGGTGATAAAGAACTGTGAGCCATTGGAATCAGG
TCCTGTATTACCCATCGCTACAACACCTGCATGTGAATGCTTTAATTTCAAATTTTCGTCAGGAAAGGTACCACCATAGATTGATT
CACTCCCTTTTCCATCACTGTGGATGACGTCTCCTCCTTGGACTACGAATCCAGATACTATACGGTGAAACTGTGTTCCTTTATAA
TGTAGAGGCTTTCCGCTTAAAGCTTTTCCCTTCTCTCCTGCGCATAAAGCCCTGAAATTTTCAACGGTTTTGGGTACA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 748 | 2e-077 |
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 739 | 2e-076 |
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 723 | 1e-074 |
| XP_002533862 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 698 | 1e-071 |
| ACU20886 unknown [Glycine max] | 682 | 7e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 519 | 3e-052 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 492 | 4e-049 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 470 | 1e-046 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 464 | 7e-046 |
| P52011 Peptidyl-prolyl cis-trans isomerase 3 | 463 | 9e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 748 | 1e-077 |
| O49605 Peptidyl-prolyl cis-trans isomerase | 723 | 9e-075 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 698 | 7e-072 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 682 | 5e-070 |
| B9HR79 Predicted protein | 670 | 1e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 723 | 6e-077 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 519 | 3e-053 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 492 | 4e-050 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 466 | 4e-047 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 460 | 2e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
