Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN74314

FASTA Sequence
Unigene ID: UN74314Length: 776 SSR 
GGAGAGCGCGATAGAGAAAGAAAGCTCGAGACTTTCGCTGCTGCGTGCGCAGAACCTCGTCGGGTTTGCGCGTCATCACACTCTTC
CATGAAGGCCGTTAGTAGAATCTGTTGTGGCTTTATCTGTTAGAACAAGGCATTTCTCATGTTATCCATCCCTGACACCAGGATGT
GGAACCTAGCCTCCAGCTATCTCACCGGACCGAAACACCACGAAACAAGAAGACCAGTCCATGATGTCCATGCCCATGATGAATGT
TCTGATGATGATGAATCCTCTGTAGGAAGCAGCAAAGAGGAAGAAGGTCTGGAGTGTCCCATTTGCTGGGAGTCATTCAACATCGT
CGAGAACGTTCCCTACGTGCTCTGGTGCGGCCACACGATGTGCAAGAACTGCATCTTGGGCCTCCAGTGGGCTATCGTGAAGCTAC
CCACACACCCGGTCCAGCTCCCTCTCTTCATCTCGTGCCCCTGGTGCAACAAACTCTCCTTCCGTCTCGTCCTCAAAGGAGCCCTC
AGGTTCCCTCACAAGAACTACTTTGTGCTTTGGATGGTCCAGAGGATGAACGGCGAGAGACGCACTTCTCAAACGGATGATCATCA
AAGAGAGCCTCCTCCTCCTCCTCCATGTCTCCACCACCGCAGTCATCATAGGGACACGTGCAGACTTCGCTGAGAAGTCCCTGGTT
TTCTTTGTCAGTTGACAGCAAGTTCCGTGGTGGTCATGTGCTGCTGATATACTCTACGCAGTACTGTCTGTGCAGCATTTGGTATG
TA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_189573 RING/U-box domain-containing protein [Arabidopsis thaliana]7107e-073
BAB03123 RING zinc finger protein-like [Arabidopsis thaliana]6614e-067
XP_002875506 hypothetical protein ARALYDRAFT_484697 [Arabidopsis lyrata subsp. lyrata]6524e-066
NP_001049345 Os03g0211100 [Oryza sativa Japonica Group]5135e-050
ACU22714 unknown [Glycine max]5082e-049

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q84JZ7 At3g292707105e-073
Q9LHJ7 RING zinc finger protein-like6612e-067
A2XDU7 Putative uncharacterized protein5134e-050
Q10Q37 Os03g0211100 protein5134e-050
C6TIH4 Putative uncharacterized protein5081e-049

Arabidopsis top hits (Blast detail)Scoree value
AT3G29270.1 ubiquitin-protein ligase7231e-076
AT3G29270.2 ubiquitin-protein ligase7231e-076
AT1G69330.1 zinc finger (C3HC4-type RING finger) family protein4532e-045
AT1G74370.1 zinc finger (C3HC4-type RING finger) family protein3895e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members