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Information for unigene UN74317
| FASTA Sequence |
| Unigene ID: UN74317 | Length: 736 |
SSR | | GGGTCCATGTGATGAAAACCAATTTTCCAAATTCGGATAAAAAGACAACACTTTTTAAGTCTTGTCTGATGGAGAATTGATTAGTA
TCCAAAGGATTATACAACACAGTGACGACGAACTCAAGCTCAGAACCACCCACCATGAATCTGTGTCTTCACAATCCGTTGACGTG
TGTTGATCGCAGCTCCTCCTTCTTCTCGGCCTCGAAGACTTCAAATCACAAGCTGGGTACTTTAAAGTTAGGGTTTTTAAAGCATC
GGAAGAAGAATCATACGGTTACAGTGAGATCTGTTTCTTCCACTTCTGTAGAAGAAAGGACGAAGAAGAGAGATGAAAGAAGTGGA
GGAGGAGGAGGAGAGGGACAAGTGTACGACGCAATCGTCATCGGCTCAGGGATCGGAGGCTTGGTCGCGGCGACTCAGCTATCAGT
TAAAGAAGCTAAAGTGTTAGTGCTGGAGAAGTATCTGATTCCTGGTGGGAGCTCTGGTTATTACGAGGGAGATGGGTACACTTTCG
ATGTTGGCTCTTCCGTCATGTTTGGTTTCAGCGATAAGGGGAATCTAAACTTGATAACTCATGCGTTGAAGGCAGTTGGTCGTGAG
ATGGAGGTTATACCTGATCCCACCACTGTTCATTTCCATCTCCCCGATGATCTCTCTGTTCAGTTCATAGAGGGTACGATGAGTTC
GTTAACGAGCTTGTTAGCAAGTTTCCTCACGAGAAGGAAGGATTCTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172167 carotenoid isomerase [Arabidopsis thaliana] | 559 | 2e-055 |
| XP_002892360 predicted protein [Arabidopsis lyrata subsp. lyrata] | 543 | 2e-053 |
| BAE79546 carotenoid isomerase [Chrysanthemum x morifolium] | 493 | 9e-048 |
| XP_002323362 predicted protein [Populus trichocarpa] | 483 | 1e-046 |
| XP_002524099 Carotenoid isomerase, chloroplast precursor, putative [Ricinus communis] | 467 | 1e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M9Y8 Carotenoid isomerase, chloroplastic | 559 | 1e-056 |
| Q8S4R4 Carotenoid isomerase, chloroplastic | 457 | 7e-045 |
| Q2VEX9 Carotenoid isomerase, chloroplastic | 453 | 2e-044 |
| Q52QW3 Carotenoid isomerase 1, chloroplastic | 423 | 6e-041 |
| Q52QW2 Carotenoid isomerase 2, chloroplastic | 423 | 6e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HXK3 Carotenoid isomerase | 493 | 7e-048 |
| B9IIH0 Predicted protein | 483 | 1e-046 |
| B9SDN0 Carotenoid isomerase, chloroplast, putative | 467 | 7e-045 |
| D0FZ29 Carotenoid isomerase | 467 | 7e-045 |
| C5Y4W1 Putative uncharacterized protein Sb05g022240 | 464 | 2e-044 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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