Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN74492

FASTA Sequence
Unigene ID: UN74492Length: 823 SSR 
GATTCAACTCGTATTTAAAAAGATGGAGCACCTGCATTTGGCTTTCCTCTAATCTGGACCAGTTGATCGAACAATCATGGCTGATC
CAGACTCCTCAGATACGTCTGATCTCAAACCCATTAGCAGCAGCGCCCCACTCTTTAGCATCCCTCGCTTTTTTGTGGCTAAAGAC
TCTGATGCAGCAGGGAGGAGCCCTACTTCTCCTCTTGATTTTTCACTCTTTGGTGGCCTCTTTAGCCCCAGGTCTCCTCCAGCTGC
TGCTGCTGCTGCTCCCCTCTCATCTCCCAGGTTTCGTAACAGATGGGCTTTTGACAAAGTCGGCCTCTCTCTTCTAAGCTCCAGCG
TTGGAGAAGAAAAAGAAAGGGGGCATGAGGAGGGTTTATTCAACAACATCGTGCTTGCCCCTCAAATCAAGCCCAGGCTGTTTGGT
TCTTGTGTTAAATCCAACTCGTTGCCTAAAAACTATGCCGCCCCTTCCATGTCTTCTGACGCGGCGGATCCTCTTCCGTGTGATTC
AGTCACTGGTGTTGTGGAGGAACTTGACCCTCCAAGGAGGTCAAGCTCATCTCCTGTGGATATAATCTCCAGCCAGGCTTATTCTC
GCTCGCTCTCTGCACGTGAGATGGCACTCTCTGAGGACTATACCTGTATCATTTCTCATGGGCCAAACCCGAAAACAACTCATATA
TTTGGTGATTGCATCCTGGATTGTGACCCCAAAGAGTTGGGAAGCAAGGATGAAACTGAGAAACAGAAGGGATGATGATGATTCTT
CACGACACACATTCATATGCACGGGAGGCATCGTCAGCAGCAGAGCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM61114 unknown [Arabidopsis thaliana]2913e-024
NP_974186 uncharacterized protein [Arabidopsis thaliana]2852e-023
NP_565224 uncharacterized protein [Arabidopsis thaliana]2852e-023
BAH19642 AT1G79970 [Arabidopsis thaliana]2833e-023
XP_002528195 conserved hypothetical protein [Ricinus communis]2214e-016

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LFZ7 Putative uncharacterized protein2912e-024
Q9CA98 At1g79970/F19K16.72851e-023
Q9SSD7 F18B13.5 protein2851e-023
B9DFX5 AT1G79970 protein2832e-023
B9SQC6 Putative uncharacterized protein2213e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G79970.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: senescence-associated protein-related (TAIR:AT2G25690.2); Has 74 Blast hits to 74 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2857e-026
AT1G79970.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: senescence-associated protein-related (TAIR:AT2G25690.2); Has 74 Blast hits to 74 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2857e-026
AT2G25690.1 senescence-associated protein-related1494e-010
AT2G25690.2 senescence-associated protein-related1494e-010
AT3G22550.1 senescence-associated protein-related1352e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members