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Information for unigene UN74517
| FASTA Sequence |
| Unigene ID: UN74517 | Length: 727 |
SSR | | GGAACCATGGAAGGGACTTATCGATGGAAGTAGCGGCGTTTTGTATTACTGGAATCCTGAAACAAACGTCACTCAATACGAAAGAC
CTTCTCCACCTTTGCCAGCTGGAGCTCCTCCGAAGCTAGCTCAGATTCCTGTACCTTCTGCAGGACAACAAGGCCATCAAGCTCAG
CTTGAACAAGCAAAACCAGTTGGTCATGTGGCTCAGCAACATGGTTTGCAACAACAGCAATTCCCATCTCAACATGGAAGGACCCA
AATGATGCAGCAGCAGCAGCAGCTTTTCCCAACAGCAGGGTCAATCCATGGCGTCACAACCACATGGGCATCCTTCACAACAAGCG
TACCAGCCAACACCACAGCAGCAGCAGCAATCAATGCAGAACCAGCATTCGCAGATGCCTCAGCAGCTGAGCCATCAGTATCCACA
TTCACAACAACAGTACATGGGTTATCGTCCTTACATGCAACTCCTGATCTCTCCCATCTTTCGCCTGTTGAAAGTTACCGAAAACA
ACATGAAATCACAACAACTTGAATGTTTGTCCATAAAACTACTGAGAATGTGGGATTGGACGAACTTCAACTGGAATAAGGTGAGA
ACATTCCAGCCCCATTCATCACATTTGAATCTAGTGGTCTCCCACCTGAATTACTTAGAGAGTTGCTTTCTGCTGGATTTCCATCG
CCAACACCGATCCAAGCTCAACATGGCCAATTGCTCTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884587 hypothetical protein ARALYDRAFT_477953 [Arabidopsis lyrata subsp. lyrata] | 391 | 6e-036 |
| NP_187299 DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] | 376 | 3e-034 |
| XP_002274485 PREDICTED: hypothetical protein [Vitis vinifera] | 271 | 5e-022 |
| CBI25982 unnamed protein product [Vitis vinifera] | 271 | 5e-022 |
| XP_002523015 dead box ATP-dependent RNA helicase, putative [Ricinus communis] | 219 | 6e-016 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQV1 DEAD-box ATP-dependent RNA helicase 40 | 376 | 2e-035 |
| Q9LYJ9 DEAD-box ATP-dependent RNA helicase 46 | 183 | 4e-013 |
| Q5JKF2 DEAD-box ATP-dependent RNA helicase 40 | 171 | 1e-011 |
| Q8H136 DEAD-box ATP-dependent RNA helicase 14 | 157 | 4e-010 |
| P46942 ATP-dependent RNA helicase-like protein DB10 | 153 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SAJ6 Dead box ATP-dependent RNA helicase, putative | 219 | 4e-016 |
| A2WR82 Putative uncharacterized protein | 171 | 1e-010 |
| Q9SP26 P72 DEAD box protein | 171 | 1e-010 |
| B9HX85 Predicted protein (Fragment) | 170 | 2e-010 |
| A9S1Y4 Predicted protein | 167 | 4e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06480.1 DEAD box RNA helicase, putative | 376 | 2e-036 |
| AT5G14610.1 ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / protein binding | 183 | 4e-014 |
| AT3G01540.2 DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase | 157 | 4e-011 |
| AT3G01540.1 DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase | 157 | 4e-011 |
| AT3G01540.3 DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase | 157 | 4e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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