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Information for unigene UN74549
| FASTA Sequence |
| Unigene ID: UN74549 | Length: 830 |
SSR | | GGGTGCTCGGTTCTTCTCTCTTTCTCTATCTCTTTCATCAATGTTATCTTTCTCTCTCTAAAAAACCATTTTCTTCCTTTTGCCAA
GAAAGTAGTGATGAGGAGGAGGAAGATGATAACAACAACAACAACAATGCAAGAGCCAATGTGTTGGACAAAAGCAATGATGAAGA
AGCTACACCGTCTAATGAAACCATACCTACTAGCGAGAGAGCAATGTATTATTACTCTGAACAAGTTGAGGAAATGGCTTACGAGG
AGGAGGATGTGAGGTTTGACTCTGAGGTAAGAGGTAAAGGAAGCTTGTTCGTAGAGGTTGATACCATTCCCATTCCAGGACCTCCT
GGCTCGTTTCTACCTAGTCCCAGGGACATGTGCATCGATGAGAATCTTGGAAACTCGTCTGTTATCACAAGCCAGTTCCAGTCTTT
CGACAGAAACTCCTCCGAATCACCTGTCTCAAACTTTGCATCCGATAGATTGAGTTTTAGTGCTCCATCTCATCACGAGACAAGTA
CTATTGATGACAAGACATAACCACCTCCAAGACTTGAGAACAACGATCACGAGTCTTGTACTTGTTGTTGTTACCAGAGAAAAGAG
AGAATCTCAGAAGGCATTGCTTTGAATCATCAAGCATCTCATCTACTGCAGAGAAGAGCTGAAGCTTATTCGTCAACAGCAATGAA
CTTAACCAAATCTTCTCCACACGTTTGGATACAAACCATTCGTTTGAGCAGTCACCATACATGATCCAGCAGAGTAGATCTCAGAG
TAAATCTCAACAGAGCTGTGTGTGCTCGAGTCTACCCGGTTTGCGGTTATGGGAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB09115 unnamed protein product [Arabidopsis thaliana] | 369 | 3e-033 |
| NP_200435 uncharacterized protein [Arabidopsis thaliana] | 369 | 3e-033 |
| BAF02131 hypothetical protein [Arabidopsis thaliana] | 369 | 3e-033 |
| NP_001190554 uncharacterized protein [Arabidopsis thaliana] | 369 | 3e-033 |
| XP_002866132 hypothetical protein ARALYDRAFT_495713 [Arabidopsis lyrata subsp. lyrata] | 363 | 1e-032 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WL76 Putative uncharacterized protein At5g56240 (Fragment) | 369 | 2e-033 |
| Q9FH15 Genomic DNA, chromosome 5, TAC clone:K24C1 | 369 | 2e-033 |
| B9T0I2 Putative uncharacterized protein | 179 | 2e-011 |
| B9GHY5 Predicted protein | 163 | 2e-009 |
| B9N5J8 Predicted protein | 154 | 2e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56240.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: HAP8 (HAPLESS 8) (TAIR:AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species: Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | 369 | 1e-035 |
| AT5G56250.2 HAP8 (HAPLESS 8) | 147 | 7e-010 |
| AT5G56250.1 HAP8 (HAPLESS 8) | 147 | 7e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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