Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN74558

FASTA Sequence
Unigene ID: UN74558Length: 485 SSR 
GGAAAATTAATATCGTCTCGGAAACTGCCATCGCCGCCCCCACATCCTCCTCCTCCTCCACCGTCCCTCCGCCATGTCGGAGATCG
ACGCGTTATTCGAATCGATCAACGTCCGAGACCTTCTCTCCGGACACGATCTCAACGATCCGACGACTCCACTATCAGCTCCCGAT
CTCCGTCTCCTCATAAACCGTCTAGACTCCCACTCCCTCCGGATCAAGTCCAAAGTCCAGTCCTACCTCATCTCCCACCGCTCCGA
GTTCTCCCACCTTTTCTCCACCTGCCAAGACGCCGTCTCCAGGACCCGCCTGATCTCCGACGACGTCTCCGATGTCGTGAAACTGG
TCTCCGACGGTTCCGTCGACGTTGTCGAGATTCGCGAAGTGGTCGACGAGATAAGGGAGAAGACAAGGGAGGTGAGGGTGAAGAGG
GAGTCGCTCGGTTTGGTGAGCGCGGTGGTGGGAGTGTGCGAGGCGTTGAGGGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879422 ATZW10 [Arabidopsis lyrata subsp. lyrata]5578e-056
NP_565757 centromere/kinetochore protein ZW10 [Arabidopsis thaliana]5542e-055
BAC42555 unknown protein [Arabidopsis thaliana]5542e-055
AAB91977 expressed protein [Arabidopsis thaliana]5542e-055
XP_002528961 conserved hypothetical protein [Ricinus communis]3938e-037

Swiss-Prot top hits (Blast detail)Scoree value
O48626 Centromere/kinetochore protein zw10 homolog5542e-056
P16356 DNA-directed RNA polymerase II subunit RPB11302e-007
P35074 DNA-directed RNA polymerase II subunit RPB11259e-007
P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment)1213e-006
P24928 DNA-directed RNA polymerase II subunit RPB11213e-006

TrEMBL top hits (Blast detail)Scoree value
Q8GY19 Putative uncharacterized protein At2g329005541e-055
B9SSJ2 Putative uncharacterized protein3936e-037
B9GTS7 Predicted protein3892e-036
C0PQW3 Putative uncharacterized protein1427e-008
Q6H9B6 Putative uncharacterized protein1257e-006

Arabidopsis top hits (Blast detail)Scoree value
AT2G32900.1 ATZW105542e-057
AT4G37450.1 AGP18 (ARABINOGALACTAN PROTEIN 18)1142e-006
AT4G35800.1 NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase1105e-006
AT1G31810.1 actin binding1089e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members