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Information for unigene UN74648

FASTA Sequence
Unigene ID: UN74648Length: 669 SSR 
TACACATCTTCGCTCTCTCGCCGTTTCGAAAAGGGGGATTTGCTAATTGCTAACAGCGAAGATGCAGGCCTATGAAGAAGACCTTG
ATGAGGAAGCTGGCTATGATGACTATTATAGTGATGATAATGGATTGGATGAGTACGAGGAGGAGGAGGAGGAAGAAGAAGTACCG
CCAAAGGAAGAACTTGAATATCTTGAGTTGCGCCAGAAGATTAAGGAGTCTATCAGGAAAAAATCGGGCAAGGGAAGTGTTAGTAA
TAATGCTCCATCTTCTCAAGACAGAAGAAAGCCCTCCATGTCGGCGGGAAAGAGTTCTCTTCAAAGTGCTCAGAGACCTGCGAATG
GTCACTCTAGACCGGCTTCCTCTGGCAGCCAAATGAATCATTCAAGACCGGGTTCCTCAGGCAGCCAAATGCCAAATTCAAGACCG
ACGACTACTTCTTCAGGAAGCCAAATGCAGTCGAGATCTATCTCGGGGAGACCAGCTTCGTCTGGCAGCAGCCAAATGCAGAAATC
AAGACCGGCTTCCTCTGGTAGCCAAATGCAAAATTCAAGACCTGGAAACCAAATGCAACAAAGGGCTTCATCCTCTGGAAGCCAGA
GACCTGGTTCCTCGGCAAACCGTCAAGCCCCCATGAGACCGCCAGTACAACGATGAATAGCCAGTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_973513 SPT2 chromatin protein [Arabidopsis thaliana]3252e-028
NP_973512 SPT2 chromatin protein [Arabidopsis thaliana]3252e-028
NP_565542 SPT2 chromatin protein [Arabidopsis thaliana]2949e-025
XP_624998 PREDICTED: RNA polymerase II-associated factor 1 homolog isoform 1 [Apis mellifera]1802e-011
XP_001568167 proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904]1712e-010

Swiss-Prot top hits (Blast detail)Scoree value
Q17RH7 Putative protein TPRXL1475e-009
P40631 Micronuclear linker histone polyprotein1377e-008
Q54KD5 P17/29C-like protein DDB_G02873991377e-008
Q75JC9 Uncharacterized protein DDB_G02716701377e-008
P54681 Protein rtoA1314e-007

TrEMBL top hits (Blast detail)Scoree value
Q3EBW3 Putative uncharacterized protein At2g227203252e-028
Q3EBW4 Putative uncharacterized protein At2g22720.23252e-028
Q9ZQ42 At2g22720/T9I22.162946e-025
A4HM87 Proteophosphoglycan ppg41711e-010
A4HM86 Proteophosphoglycan ppg41602e-009

Arabidopsis top hits (Blast detail)Scoree value
AT2G22720.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37860.1); Has 34422 Blast hits to 21553 proteins in 958 species: Archae - 9; Bacteria - 2953; Metazoa - 16492; Fungi - 6405; Plants - 1061; Viruses - 320; Other Eukaryotes - 7182 (source: NCBI BLink).3742e-036
AT2G22720.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37860.1); Has 34349 Blast hits to 21327 proteins in 952 species: Archae - 9; Bacteria - 3053; Metazoa - 16365; Fungi - 6337; Plants - 1046; Viruses - 325; Other Eukaryotes - 7214 (source: NCBI BLink).3742e-036
AT2G22720.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin SPT2 (InterPro:IPR013256); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37860.1); Has 18810 Blast hits to 9739 proteins in 609 species: Archae - 9; Bacteria - 1424; Metazoa - 8282; Fungi - 2696; Plants - 486; Viruses - 222; Other Eukaryotes - 5691 (source: NCBI BLink).3439e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members