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Information for unigene UN74736
| FASTA Sequence |
| Unigene ID: UN74736 | Length: 811 |
SSR | | TCGTTCGGCCGTTTCAGCTCTCTCTCTCTCAATCGCAAAACAAAGAATGGCTGGACAAAAGCAAGAGCTTCCCGTTTCCGGCGAAC
CCTTATCCGCCGTCGAGAGTCCGATGACAGACTCGACAAACAAGAAGAAGAAAAAGAGCAAGAAGAACAAACACGCAGAGGTCCAA
GTGCCTCAAGAGGTCGTCGAGGAGTTGAGTAGTAAAGAGAAGAAGAAGAAGCGTAAGAGAGAGGAGAAAGAGATGGAGAAGGAGAA
GAAGAGGAAGGACGAAGAGAGTAAAGTCCCCGAAAAGAAGGCGGAGCCTGAGGCTTCAAACGGAGGAGAAAGTGAGCAGAAGGTTG
TTGTGACCGGGAAGGGTGCGGAGGAAGCAAAGTACGCAGCTTTGACATCATTTGCTGAGTCGAAGTTGCCCGAGAATGTTCTTGAT
TGCTGCAAGACTTTCCAGAAACCTTCTCCGATTCAGTCTCATTCGTGGCCCTTTTTGTTGGATGGTCGCGATCTTATCGGGATCGC
CAAAACCGGTTCAGGTAAGACATTGGCGTTTGGGATTCCTGCGATTATGCACATGTTGAAGAAGAACAAGAGTGGTAAAGGAACAA
GGAACCCGACTTGTCTTGTTCTTTCTCCGACAAGAGAGTTAGCTGTTCAGATTTCTGATGTTTTGAGTGAAGCTGGAGAACCGTGT
GGTTTGAAATCGATTTGTGTGTATGGTGGAAGCTCTAAAAGCCTCAATTGACGCCATTCGATCTGGAGTTGATATTGTCATTGGTA
CGCCAGGTCGCTTGAGAGACTGATTGATCTATGTGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174479 DEAD-box ATP-dependent RNA helicase 5 [Arabidopsis thaliana] | 875 | 6e-092 |
| XP_002890959 predicted protein [Arabidopsis lyrata subsp. lyrata] | 847 | 1e-088 |
| XP_002519000 dead box ATP-dependent RNA helicase, putative [Ricinus communis] | 600 | 5e-060 |
| ACQ90244 DEAD-box RNA helicase [Glycine max] | 572 | 8e-057 |
| CAN76636 hypothetical protein VITISV_010658 [Vitis vinifera] | 547 | 6e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C551 DEAD-box ATP-dependent RNA helicase 5 | 875 | 3e-093 |
| Q6YS30 DEAD-box ATP-dependent RNA helicase 5 | 492 | 7e-049 |
| Q6CT46 ATP-dependent RNA helicase DBP3 | 327 | 9e-030 |
| A5DAC8 ATP-dependent RNA helicase DBP3 | 311 | 7e-028 |
| Q755A5 ATP-dependent RNA helicase DBP3 | 308 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RZ31 Dead box ATP-dependent RNA helicase, putative | 600 | 3e-060 |
| C6G238 DEAD-box RNA helicase | 572 | 6e-057 |
| A5BAJ6 Putative uncharacterized protein | 547 | 4e-054 |
| C0PDP9 Putative uncharacterized protein | 508 | 1e-049 |
| B8A6R8 Putative uncharacterized protein | 492 | 1e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G31970.1 STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding | 875 | 2e-094 |
| AT5G63120.2 ethylene-responsive DEAD box RNA helicase, putative (RH30) | 264 | 2e-023 |
| AT5G63120.1 ethylene-responsive DEAD box RNA helicase, putative (RH30) | 264 | 2e-023 |
| AT1G55150.1 DEAD box RNA helicase, putative (RH20) | 252 | 4e-022 |
| AT3G01540.2 DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase | 235 | 4e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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