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Information for unigene UN74800
| FASTA Sequence |
| Unigene ID: UN74800 | Length: 801 |
SSR | | GGAAGCACCAGCAGATTCTTCGAACATTCAAAACCTCGCTTTCGGTTCTCTTCAAAGCTTTGAAGAATAGGGGCATGGAAGAAGAA
GCAAACGCAACGAGATATTGGTGCCACATGTGTTCCCAAACCGTGAACGCGGTGGTGATGGAAGAGGAGATCAAATGCACCCTCTG
TCGAAGCGGCTTTATTGAAGAGATGGATGAGGATCATCACCACTCTTCTTCAGATGGCAATGATCGGAGGAGAGCAACAAACAACG
CTTCAATCTTGGCTCCCATCTTAATGGAAATGATCAACAACTCTTCGTCTTCTTCTGCTACAAGGAACCTTAGTGCTGAGACTCTG
AACGAAATAATCCGAAACAACAACAACAGACCACGCTCTGTTTCCGTTGTGCAACTTCTTCATGGAGTAAGACCACTTGAACCTGA
GAGTAGCGATGATAACAACAACAACAACAACAACGATGGGGCGGATGGAGAGAGAGAGAGGACGCATGATCTTCATCGATCCGCAT
CGTCAGATCATCGCCATCCCGAGCTCTCTCGTTAGGGATTCCATCCCTGCTGGTTCTTCTCTGAGCGACTATTTCATCGGTCCTGG
ATTCGAAGCCCTGCTTCAGCGTTTAGCGGAGAATGATCCCAACAGATACGGAACTCCTCCAGCTCGTAAAGAAGATGTTGAGTCTT
TGGCTACTGTCAGAATCCAGGATCCGAGTCTGCAGTGTTCTGTGTGTTTGGATGATTTGAGGTGGGATCGAGCTAAACAGATGCCT
TGTTAGCACAGCTCCATGCTGAGTGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894508 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 313 | 8e-027 |
| NP_564693 RING/U-box domain-containing protein [Arabidopsis thaliana] | 308 | 3e-026 |
| NP_200445 RING/U-box domain-containing protein [Arabidopsis thaliana] | 293 | 2e-024 |
| ADK63410 C3HC4 type zinc finger protein [Brassica rapa] | 284 | 2e-023 |
| XP_002864451 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 281 | 4e-023 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVU8 At1g55530/T5A14_7 | 308 | 2e-026 |
| Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD7 | 293 | 1e-024 |
| B9GXX2 Predicted protein (Fragment) | 268 | 1e-021 |
| B9SBM6 Zinc finger protein, putative | 261 | 6e-021 |
| B9GLB5 Predicted protein (Fragment) | 251 | 9e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 308 | 1e-028 |
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 293 | 7e-027 |
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 258 | 9e-023 |
| AT3G13430.2 zinc finger (C3HC4-type RING finger) family protein | 258 | 9e-023 |
| AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein | 200 | 5e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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