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Information for unigene UN75778
| FASTA Sequence |
| Unigene ID: UN75778 | Length: 615 |
SSR | | GGAAAGGCGACCACGCATAAAGAAAGATCAAAACCTCCCATCACCCTTCCAAAAAGAACTTATTATAATCCTTCCTTTGTTATAAA
AAAAATTATATAATCAAAAAAAATTATATTTCAAAAAAGTTTGTAGCTTTGAAGGCAGAGAGATCAGGCGACTGAGAGAGAGAAAG
AGTGGTGTGGAAACAAAACCACGATCTGAGTTTTTCCGACAACATTATTCTCCGATCGGAGCTTTAGACATTCCGACAGAAGCATA
AAAAAGATCGTTCCTTTCGTGTGTGTGTGTGTGCGTGAGGGGTTTGTCGGAAAATGGATCCGTCGATTGAATGGACCTCTCGTGGA
GTCGAAGCTTCGATGTGGCGGTTAGGGTTAAGCGGCGGCGGAGCTGGAGGAGGAGGAGGAGGAGAAGCGTATCCTGAGCGATCAAA
TGAGCCTGATTGTATTTATTACTTGCGTACCGGTGTTTGCGGGTACGGCTCAAGATGTCGATTTAATCACCCGCGTGATCGTGGAG
CGGTTGTTGGAGCTGTGAGAGGAGGAGGAGGAGGAGATGGAGCTTTACCGGAGAGAATGGGACAACCGGTTTGTCAGCATTTTATG
CGAACGGGAACGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187292 zinc finger CCCH domain-containing protein 34 [Arabidopsis thaliana] | 451 | 5e-043 |
| BAF02113 hypothetical protein [Arabidopsis thaliana] | 451 | 5e-043 |
| ADK63414 CCCH type zinc finger protein [Brassica rapa] | 443 | 4e-042 |
| XP_002884577 hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp. lyrata] | 418 | 3e-039 |
| AAF08587 hypothetical protein [Arabidopsis thaliana] | 406 | 8e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SQU4 Zinc finger CCCH domain-containing protein 34 | 451 | 2e-044 |
| Q6NPN3 Zinc finger CCCH domain-containing protein 58 | 381 | 3e-036 |
| Q5NAV3 Zinc finger CCCH domain-containing protein 5 | 294 | 4e-026 |
| Q5NAW2 Zinc finger CCCH domain-containing protein 6 | 275 | 6e-024 |
| Q84W91 Zinc finger CCCH domain-containing protein 32 | 244 | 2e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5B1K6 Putative uncharacterized protein | 340 | 2e-030 |
| B9N500 Predicted protein | 315 | 2e-027 |
| B9RT23 Nucleic acid binding protein, putative | 312 | 4e-027 |
| B9HSD6 Predicted protein | 302 | 6e-026 |
| B9S3U9 Nucleic acid binding protein, putative | 295 | 4e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06410.1 nucleic acid binding / zinc ion binding | 451 | 2e-045 |
| AT5G18550.1 nucleic acid binding / zinc ion binding | 381 | 3e-037 |
| AT2G47850.1 zinc finger (CCCH-type) family protein | 244 | 2e-021 |
| AT2G47850.2 zinc finger (CCCH-type) family protein | 244 | 2e-021 |
| AT2G47850.3 zinc finger (CCCH-type) family protein | 244 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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