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Information for unigene UN75884

FASTA Sequence
Unigene ID: UN75884Length: 639 SSR 
GGATAGTGAGAGAGAGAGAAGATAGCTCTTCTTTATTATGGATTACAGATAAAGACAGCTAATCTCAGTGAACACCAATCTCAGAG
TAGAGACTTCACTCTTAGTAGATTAAAGAAACAGAGGAAGACAAGTCTTTCTCTTTACTCTGTTGTCCCTGACCATTCCAGCTCTG
CGCACAAGCTCCGTACCCCTGCTAGGCGTATCTCTAGAATCTACATCCACGCCTGTAAGCATTTCGCTAGAGGAAAGCGTGCTACC
ATCGCTAGGAACTCTGTTTCTGGTCTTGTCTTGGTAGCTAGATCTTGTGGGAACGATGTTTCAAGGTTGACGTTTTGGTTATCAAA
CATTATAACTCTAAGGGAGATCATTTCGAAAGCGTTTGGTAAGCCTCGTGTCACAGAGAGCTCTGAAGCTAATGGGAGTGAGAATG
GTGGTGACTCAGGGAAGAAAACGAACCTGAGATGGAAGAATGGTTTGCAAGAGCTTCTTGAGGATTGGCAAGAAACTGAAACCTTC
ACTGCTGCACTTGAGAAAGTCGAGCTCTGGGTCTTCTCTAGAATCGTCGAGTCTGTTTGGTGGCAGTCTTTACTCCTCATATGCGA
TCCCCTGAGAACAGCTCATCAGCTTCTAAATCGAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879979 hypothetical protein ARALYDRAFT_483324 [Arabidopsis lyrata subsp. lyrata]6658e-068
NP_181761 nucleolar protein gar2-like protein [Arabidopsis thaliana]6641e-067
CAB41177 putative protein [Arabidopsis thaliana]5743e-057
NP_191337 uncharacterized protein [Arabidopsis thaliana]5743e-057
XP_002878171 hypothetical protein ARALYDRAFT_486231 [Arabidopsis lyrata subsp. lyrata]5662e-056

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SLC7 Putative uncharacterized protein At2g423206647e-068
Q9SVZ2 Putative uncharacterized protein F15B8.305742e-057
B9SL81 Putative uncharacterized protein3923e-036
B9RMI3 Putative uncharacterized protein3842e-035
B9N6V2 Predicted protein (Fragment)3833e-035

Arabidopsis top hits (Blast detail)Scoree value
AT2G42320.1 nucleolar protein gar2-related6645e-070
AT2G42320.2 nucleolar protein gar2-related6645e-070
AT3G57780.1 EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024 Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181; Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other Eukaryotes - 1320 (source: NCBI BLink).5741e-059
AT3G01810.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384 proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi - 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink).3662e-035
AT3G01810.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1224 Blast hits to 385 proteins in 102 species: Archae - 2; Bacteria - 107; Metazoa - 205; Fungi - 107; Plants - 62; Viruses - 0; Other Eukaryotes - 741 (source: NCBI BLink).3662e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members