RadishBase

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Information for unigene UN76013

FASTA Sequence

Unigene ID: UN76013	Length: 557	SSR
GGCACCATCGATTTCCCCGAGTTCTTGAACCTCATGGCTCGTAAGATGAATGACACCGACTCCGAGGAAGAGCTCAAGGAAGCTTT CCGTGTTTTCGACAAGGACCAGAACGGTTTCATCTCGGCTGCCGAGCTCCGCCACGTGATGACAAACTTAGGCGAGAAGCTCACGG ATGAAGAGGTCGATGAGATGATCAAGGAAGTTGATGTTGATGGCGATGGTCAGATTAACTCGAGGAGTTTGTTAAGGTCATGATGG CTAAGTGATGTGCTTTTGGTTTTGGTTTGCCTCTCTCTCTCTCCTACTAAAAACTCTTTTATGTAATTCTTATATTTACTTATGTA TGTTGTTAAATTTTTATTCATGGGACTCGGTTCTGTTTTCTGGTTGTTTTAAGACCAAATGCCATCTATTTTATGCTTTGTGTCTG AAGTCTTGTCTTTTGTTTTGTTTTGTAATTGTGTAACTTCGTCTAGTTTGGTGGTTTCTTGTTAATTCTAGTAATGTATAAGAAGT TGAATTCTACGCACATTCACTATGCTCAGCTCCAAATGTAG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
ABR21744 calmodulin [Actinidia deliciosa var. deliciosa]	386	1e-035
NP_180271 calmodulin 5 [Arabidopsis thaliana]	385	2e-035
NP_850097 calmodulin 5 [Arabidopsis thaliana]	385	2e-035
AAA32765 calmodulin-3 [Arabidopsis thaliana]	385	2e-035
CAA78058 calmodulin [Arabidopsis thaliana]	385	2e-035

Swiss-Prot top hits (Blast detail)	Score	e value
P25069 Calmodulin-2/3/5	385	9e-037
P62200 Calmodulin-1/11/16	382	2e-036
A2WN93 Calmodulin-1	382	2e-036
Q0JNS6 Calmodulin-1	382	2e-036
P62199 Calmodulin-1	382	2e-036

TrEMBL top hits (Blast detail)	Score	e value
B1NDM0 Calmodulin	386	9e-036
Q3EBT4 Putative uncharacterized protein At2g27030.3	385	1e-035
Q682T9 Calmodulin	385	1e-035
Q6LD03 Calmodulin	385	1e-035
Q6LDG2 Calmodulin	385	1e-035

Arabidopsis top hits (Blast detail)	Score	e value
AT2G41110.1 CAM2 (CALMODULIN 2); calcium ion binding / protein binding	385	9e-038
AT2G27030.1 CAM5 (CALMODULIN 5); calcium ion binding	385	9e-038
AT2G27030.3 CAM5 (CALMODULIN 5); calcium ion binding	385	9e-038
AT2G27030.2 CAM5 (CALMODULIN 5); calcium ion binding	385	9e-038
AT3G56800.1 CAM3 (CALMODULIN 3); calcium ion binding	385	9e-038

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	1			100%

Unigene Members