Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN76068

FASTA Sequence
Unigene ID: UN76068Length: 760 SSR 
GGAACAGAAACCATATCATTAACCCTAATTCACACACCTCCATCTGCAAAAACTCTGAAAGCCACAGATCTACACATCTCTCCGGC
TCCCCGATCTCGACCAGGGAGATTCTGAAGATGGTGTCTGATGCTAGCAAGAAGAAGGCTGCTCAGAAGAAAGCCGCCGCCGCCGC
CAAAAGAGGCGGTAAATCCGCCGCAGCAGCTTCCAAATCCGCCGCTACTTCTTCCAACGGAGGAGTCGACAGCTTGTCGAGCGGCG
TCGACGCCCTTCAGATATCCGACCGGACCTGTACCGGAATCCTCTGCTCTCATCCTCAATCGAGAGATATTCGAATAGAGTCGTTG
TCTGTTACGTTTCACGGTTACGACCTAATTGTTGATTCGATGCTGGAGCTTAACTACGGAAGACGTTACGGTCTCCTCGGGTTGAA
CGGTTGTGGGAAGCCTACTCTTTTAACCGCCATTGGACTCAGGGAGCTCCCTATTCCCGACCACATGGATATCTACCATCTCTCCC
ACGAGATTGAAGCCACTGACATGACTTCTCTCGAGGCTGTCATGAGCTGTGACGAGGAGAGGTTGAAGCTGGAGAAGGAGATCGAG
ACTCTCGTTGAGCACGATGATGGAGGTGGAGAGCGTCTTGATACGATCTATGAGCGGTTAGAAGCAATGGATGCTGCTACCGCGGA
GAAGCGTGCTGCCGAGATTCTGTTTGGTCTTGGTTTTGACAAGGAGATGCAGCTAAGAAGACTAAAGATTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33907 unnamed protein product [Thellungiella halophila]9751e-103
NP_200887 ABC transporter F family member 1 [Arabidopsis thaliana]9347e-099
XP_002314297 ABC transporter family protein [Populus trichocarpa]8801e-092
XP_002523695 ATP-dependent transporter, putative [Ricinus communis]8674e-091
BAA94511 ABC transporter homolog [Populus nigra]8585e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q9FJH6 ABC transporter F family member 19433e-101
Q99LE6 ATP-binding cassette sub-family F member 24514e-044
Q9UG63 ATP-binding cassette sub-family F member 24452e-043
Q2KJA2 ATP-binding cassette sub-family F member 24399e-043
P40024 ABC transporter ATP-binding protein ARB14182e-040

TrEMBL top hits (Blast detail)Scoree value
B9HQM5 ABC transporter family protein8809e-093
B9SCH6 ATP-dependent transporter, putative8673e-091
Q9MAY4 ABC transporter homolog8583e-090
Q5GMM7 ABC transporter protein (Fragment)8531e-089
B9N856 ABC transporter family protein8522e-089

Arabidopsis top hits (Blast detail)Scoree value
AT5G60790.1 ATGCN1; transporter9433e-102
AT3G54540.1 ATGCN4; transporter3035e-028
AT1G64550.1 ATGCN3; transporter1825e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members