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Information for unigene UN76078

FASTA Sequence
Unigene ID: UN76078Length: 568 SSR 
GGAAATTAAATATAAATTATATATCGAGAAGAAAAGAAAGAAAGAAAAAGTAAAGTAGCCGCCTCATCTTCATCGTCTCACCTCCT
TGGCTCTCTCTCTCTCTCTCTCGAGATGGGAAGCCCGATTTAGGGTTTCGTTCGATCTGACCATCACCACAACGCTCTAGACTCTT
CCTGTTTTAAAAGACAGTTTCTTTGTTGAGAATTATTATGCCGAAAGAGAGGAAAGACCGATCTGTATCTCATGAAAGGTTAAGAG
CATCATCGTCGCCTTTATATTGCGAGTCAAGCCGTGCTTTGAAGCCTCCTAGTGAGAAGCAAGTTAAGGAATGGGAAGAAGCTCGA
TGTCCTGTCTGTATGGAACATCCTCACAACGGCATCCTTCTCATTTGCTCTTCCTTTGACAAAGGTTGTCGTCCTTACATGTGTGA
CACTAGCCACCGTCATTCCAACTGTTTCGATCAGTACCGTAAAGCTTCCAAACAGACGACACCAGCTGAGACTGAAGGTGGTGGTG
GTGTAGCTTCAGGCTCCAACACTGTAGATTTAAGAGAAGAGGCTGCATCTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875291 hypothetical protein ARALYDRAFT_904770 [Arabidopsis lyrata subsp. lyrata]3888e-036
NP_566784 uncharacterized protein [Arabidopsis thaliana]3833e-035
XP_002285038 PREDICTED: hypothetical protein [Vitis vinifera]3502e-031
CBI28161 unnamed protein product [Vitis vinifera]3457e-031
XP_002330503 predicted protein [Populus trichocarpa]3422e-030

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LUA0 AT3g25910/MPE11_63832e-035
B9N5I9 Predicted protein3421e-030
C6TEK7 Putative uncharacterized protein3322e-029
B9SEM7 Putative uncharacterized protein3312e-029
B9H984 Predicted protein3276e-029

Arabidopsis top hits (Blast detail)Scoree value
AT3G25910.1 zinc ion binding4002e-039
AT1G15430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G80220.1); Has 144 Blast hits to 135 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2423e-021
AT1G15430.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G80220.1); Has 144 Blast hits to 135 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2423e-021
AT3G24740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2244e-019
AT3G24740.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2244e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members