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Information for unigene UN76119
| FASTA Sequence |
| Unigene ID: UN76119 | Length: 753 |
SSR | | GACTCACTGATGGAACCACTATCCAAGGAGACGCTTATGTGTTCGCCACTCCAGTTGATATCCTGAAGCTCCTTTTGCCTGATTCA
TGGAAAGAAATACCATACTTCAAGAGTTTGGAGAAGTTAGTTGGTGTTCCAGTCATTAACGTTCATATATGGTTCGATCGGAAACT
GAAGAACACATATGATCACTTACTCTTTAGCAGAAGTAACCTTCTGAGTGTGTATGCAGACATGTCGTTAACTTGCAAGGAATATT
ACGATCCAAACCGATCAATGCTGGAGCTAGTATTTGCACCTGCAGAGGAATGGATATCACGGACCGACTCTGACATCATAGATGCA
ACAATGAAAGAGCTCGAGAAACTCTTCCCTGACGAAATCGCAGCTGACCAAAGCAAAGCTAAAATTCTCAAGTACCATGTCGTCAA
AACTCCAAGGTTTAGACCAAACCCCAAATGTCACATTTTTAAATTAGTTTCAAATGGATGCAATCTCTCTTTTCTCTCTCTCTCTC
TCTCTCTCAGGTCTGTGTACAAGACCATCCCAGACTGTGAACCATGTCGTCCTCTACAGAGATCTCCTATTCAAGGCTTTTACTTA
GCTGGAGACTACACTAAACAGAAGTACTTAGCTTCCATGGAAAGCGCCGTTCTCTCTGGCAAATTCTGCTCTCAGTCTATTGTGCA
GATTATGAGCTATTGGCTGCGTCTGGACGTCGAAACTTGTCGGAGACACTGTATCAACATGAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACT20709 chloroplast phytoene desaturase [Brassica rapa] | 759 | 1e-078 |
| ABV46593 phytoene desaturase [Brassica oleracea var. botrytis] | 758 | 2e-078 |
| ADT89708 chloroplast phytoene desaturase [Brassica napus] | 755 | 4e-078 |
| ADT89706 chloroplast phytoene desaturase [Brassica napus] | 748 | 3e-077 |
| ACM68700 chromoplast phytoene desaturase [Brassica rapa subsp. pekinensis] | 741 | 2e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q07356 Phytoene dehydrogenase, chloroplastic/chromoplastic | 731 | 1e-076 |
| A2XDA1 Phytoene dehydrogenase, chloroplastic/chromoplastic | 688 | 1e-071 |
| Q0DUI8 Phytoene dehydrogenase, chloroplastic/chromoplastic | 688 | 1e-071 |
| P80093 Phytoene dehydrogenase, chloroplastic/chromoplastic | 680 | 1e-070 |
| P28554 Phytoene dehydrogenase, chloroplastic/chromoplastic | 677 | 2e-070 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C7DR84 Chloroplast phytoene desaturase | 759 | 1e-078 |
| B2X8P6 Phytoene desaturase | 758 | 1e-078 |
| C5H4P5 PDS | 758 | 1e-078 |
| B9VUW2 Chromoplast phytoene desaturase | 741 | 1e-076 |
| Q3EA34 Putative uncharacterized protein At4g14210.2 | 731 | 2e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G14210.1 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase | 731 | 1e-077 |
| AT4G14210.2 PDS3 (PHYTOENE DESATURASE 3); phytoene dehydrogenase | 731 | 1e-077 |
| AT3G04870.1 ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase | 147 | 6e-010 |
| AT3G04870.2 ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase | 147 | 6e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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