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Information for unigene UN76236

FASTA Sequence
Unigene ID: UN76236Length: 680 SSR 
CAAACAACTAAGGGTTATTTAAAAAATGAAAGCAATCATATGAAAAAGACTCTTTAAAATCAAAGGTGGAGGGAACAACACTACTC
TCATTCTTCAAACCTCGAACCCAAAACCGCTAACAAAAAACACCAACCCTATGTTATGTTCCCCATTTGTCCTTCCCCCTTCAAGA
CTTCACAGAGCTCAAAACTTTTATTTTTGGGTCAAACATCAAATCATAAAATCTTCCATTTACCGCCTTCCGTTCCCACCTCTTCT
TTGGTATCGGTGGTTGATCATCCTGTAATTGCGAAATCCGCTTGTCCTGTTGGCTGTAGCAAAAAGCGGTTGCAAACGGCTGCTTA
TGCCAAATGCTCCTAGCGATCCCAGATCCAAGTACCCATCATCATCCGTAGAATCATCCGACTCAAGGTCATCATCATCATCATCG
TCATAAGAATCAAATTCACCGTTGTAAGGCTCAATAACATAGTCTCCAAAAACCATAGCACCGGGTGTTGACGACATGAGCGTGCT
AATTACATCACTCCTCTCCCTCTCAACTCAAGCTTCTTCCACTTCTCCTCCATCACAGGATCAATGGCTCTTGGTTTAGCTCTCGG
ATGAACCTCCTTGACATGTTTCTTGAGCTGCCTATAGCTTCCGGAAAACAAACAGCTGTCGTTCATGCATCCCCTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192586 uncharacterized protein [Arabidopsis thaliana]2213e-016
XP_002874536 hypothetical protein ARALYDRAFT_489753 [Arabidopsis lyrata subsp. lyrata]2186e-016
AAC28186 T15F16.1 gene product [Arabidopsis thaliana]2123e-015
XP_002513831 conserved hypothetical protein [Ricinus communis]1891e-012
XP_002304076 predicted protein [Populus trichocarpa]1765e-011

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M0T4 AT4G08460 protein2212e-016
O81474 T15F16.1 protein2122e-015
B9RJB2 Putative uncharacterized protein1891e-012
B9GZR5 Predicted protein1763e-011
B9GUG0 Predicted protein (Fragment)1754e-011

Arabidopsis top hits (Blast detail)Scoree value
AT4G08460.1 protein binding / zinc ion binding2211e-018
AT4G08460.2 protein binding / zinc ion binding2211e-018
AT1G77770.1 protein binding / zinc ion binding1718e-013
AT1G77770.2 protein binding / zinc ion binding1718e-013
AT1G68140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 145 Blast hits to 136 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1521e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members