Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN76367

FASTA Sequence
Unigene ID: UN76367Length: 693 SSR 
ACTAGACAAGTGAACACACACATAATACTGTAATTCAATTTATATAGGTTGCAGAGCTTAAGAAACAAAGATTTAAAAAAAAACAA
TGCTTGCCTATATACAAAAAAATCTGTCCAGGCTATGCAGAAGACCAGTTATACTATTGCCACTTGCAAAATGGTCTTCAAGGTAA
TGTTTACCCAACGATTCCGAGGCTAAAATGGTAAAGTGCGATCTCTGATTATAAGTTGCAACCTTCCATGCTTTTAAGAGTGTTTT
ATCAGGATGCACCACTGCTACCAAAAGAACCTCCAAGTTTGACTTGAAAAGCGTCGTGCAGACTTATCTTAATTGTTTGGCTCTGT
GATGATGATGATGATCTATGTATGTCGATACATTCCTCGAGATCCCCTTCACATGTCAGAAGAACCAACTCCTTATCATCATCCAG
GTACTTGAGATCAAACCAGGAAACATCATCTATGTTGAAACGCCTAGCAATCTCTCCCTCCAGCTCTCTGTAGCCCCAGCTCGGAG
GCAAAGTAAACCGTATTATGGCCTCACCAAACGTTGCTTTCACTTTAATGCCCCCTCCAGCTCTTAAGCTCTTGCTGCTACTACTA
CCCGGTACATTTTCAAGAAGAGGAGGCTCCTTGAGACATTTTGTTTCCTCTTGATTCCCATTATGCAGTTCTGCCTCGCCGTGAGC
TTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886100 predicted protein [Arabidopsis lyrata subsp. lyrata]4419e-042
Q7X9B9 RecName: Full=Protein NLP2; Short=AtNLP2; AltName: Full=NIN-like protein 2; AltName: Full=Nodule inception protein-like protein 24311e-040
XP_002867080 RWP-RK domain-containing protein [Arabidopsis lyrata subsp. lyrata]4311e-040
NP_195253 RWP-RK domain-containing protein [Arabidopsis thaliana]4311e-040
F84548 hypothetical protein At2g17150 [imported] - Arabidopsis thaliana4113e-038

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8H111 Putative uncharacterized protein At2g171504112e-038
B9HPY0 Predicted protein3242e-028
B9MYZ3 Predicted protein (Fragment)3242e-028
A5C073 Putative uncharacterized protein3143e-027
B9HN04 Predicted protein2955e-025

Arabidopsis top hits (Blast detail)Scoree value
AT4G35270.1 RWP-RK domain-containing protein4316e-043
AT2G17150.1 RWP-RK domain-containing protein4218e-042
AT4G38340.1 RWP-RK domain-containing protein2263e-019
AT1G20640.1 RWP-RK domain-containing protein2174e-018
AT1G20640.2 RWP-RK domain-containing protein2174e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members