Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN76415

FASTA Sequence
Unigene ID: UN76415Length: 620 SSR 
CATTGCGTCTCTTTGTTTGTTTGTTTCAGCTAGGTTCGCTTTGGGTAAGAAAGCTGCTTAAACCTGTTCTATGTGAGGAGAAATCA
GAAGATGGTCAAGACTACGGATTAAAAATGCTCTCTCTCTCTCTAAAAAATGCTCTCTCTCTCTCCCGTGTTATTAACTACTTGTC
ATGTTATGTTTTGTCTGGATTTTATATGTTATGTTTATTTTCTTGTGTGCTGAGTTTTATGATAAAACATTGTAAAAACAATATGA
CAAACTTGGTTGTCCAATCAAGTTTTTAGTAACTTAAAAAGACTTAAGCTTAATATCTATGTTTCCACAAAATGCAATACTGATCC
AAGGCCTCGGTTCCCCCTTGTCCACCGTAACCGTTGATCATGGTTTTGTTTTCCAGATTATCAAGTCTCTTTTCCAAATCTATGTA
TAGCTCTATTGGCAAACGCAGCTTCCAACAATTAAGTTGCACTTTCAGTCTTTCACAATTCGTTTTGTAATCCTTTTGAAGGTTTC
TAAAGTCCTTGAGAGGCTTTGCTCTTCAATGCTCTATGTTGTTCTTACAACCTTCTTCGCAACAATATCATCCCTCGCAGTGACTC
TGGACCCTTTCGGAATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002301059 predicted protein [Populus trichocarpa]1362e-006
CAC86165 WIP1 protein [Glycine max]1352e-006
ACU19504 unknown [Glycine max]1352e-006
NP_172787 C2H2-like zinc finger protein [Arabidopsis thaliana]1343e-006
XP_002284131 PREDICTED: hypothetical protein [Vitis vinifera]1343e-006

Swiss-Prot top hits (Blast detail)Scoree value
Q8VWG3 Protein TRANSPARENT TESTA 11252e-006

TrEMBL top hits (Blast detail)Scoree value
B9GUX5 Predicted protein (Fragment)1361e-006
C6TCF2 Putative uncharacterized protein1352e-006
Q8VXK3 WIP1 protein (Fragment)1352e-006
A5AQU8 Putative uncharacterized protein1342e-006
B9RJL7 TRANSPARENT TESTA 1 protein, putative1342e-006

Arabidopsis top hits (Blast detail)Scoree value
AT1G13290.1 DOT5 (DEFECTIVELY ORGANIZED TRIBUTARIES 5); transcription factor1341e-008
AT1G08290.1 zinc finger (C2H2 type) protein (WIP3)1322e-008
AT3G57670.1 NTT (NO TRANSMITTING TRACT); nucleic acid binding / transcription factor/ zinc ion binding1287e-008
AT3G20880.1 zinc finger (C2H2 type) protein (WIP4)1287e-008
AT1G51220.1 zinc finger (C2H2 type) protein (WIP5)1279e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members