Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN76419

FASTA Sequence
Unigene ID: UN76419Length: 787 SSR 
AATGTGGAAGGTGTGTCATTCTCAATAGAAAGCTTTATGAGTTTGCAAAAGATAAAAACAAAAACGAATTCAAATTGTTTCTCTTC
TCTCATCAAACATTGTACATAAAATCTAAAACATATTTTTCCATTCTTTGCCTCTCTCTCTCTCTTCTGCCATAAGATTCTTCAAC
TCACCTCTGTTTAATCGAAGCAACGTGTGCGGCCTAATGAAACACGGATTGATGATAATACCCTTACTGAAAGTAAAAAGGCAGCT
GCTACTTTTACCACCCAATTTTGCTTTTTAATCAGTACGGTCTGTAGCGCATTGGCCGTCTGAACCTGGGAACTCTCCCATAACCA
TAAGGAGCATAAAATGGAATTCCAGGCATGAATCCTCTCATGGGTCTAAAGGGACGCCTTCCTCGGAACTGTCTCATTCCAGGGAC
GTTAGTTCTCTTTGCTGAAACCTTTATCTGACGACCATGCAGCTCTGACTCGTTCAAGATAAGAGAATTCTGAACGGCATCTTCTT
CCACGAATTCGACGTAGGCAAAACCTTTGGGTTGGCCAAACTTGTCTGTCAGAATCGTAACCCTATTGACTGTTCCGCAGGACTGG
AAATGTTGCTGGACTTCCTCTGGGGTACATGCATAGTCCACATTGCCAAAATAGATTGAACGGGAATCAACTTCCTCCTTCTCAGC
CGAACTAATAGCACTTGATGGGTCTTGATCAGCGCCCATCTCTTTCTCAGCTTTGGCTTGCATTTCACGCAAGCTCCAGCTTCTTC
CTCGATCTCCTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864097 hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp. lyrata]7743e-080
AAM61036 contains similarity to poly(A)-binding protein II [Arabidopsis thaliana]7635e-079
NP_568751 polyadenylate-binding protein 1 [Arabidopsis thaliana]7635e-079
CAN77560 hypothetical protein VITISV_031100 [Vitis vinifera]6945e-071
XP_002279148 PREDICTED: hypothetical protein [Vitis vinifera]6945e-071

Swiss-Prot top hits (Blast detail)Scoree value
O14327 Polyadenylate-binding protein 23341e-030
Q9DDY9 Polyadenylate-binding protein 2-A3214e-029
Q7ZXB8 Polyadenylate-binding protein 2-B3206e-029
Q28165 Polyadenylate-binding protein 23206e-029
Q86U42 Polyadenylate-binding protein 23206e-029

TrEMBL top hits (Blast detail)Scoree value
Q8LG48 Contains similarity to poly(A)-binding protein II7634e-079
Q93VI4 AT5g51120/MWD22_67634e-079
A5C441 Putative uncharacterized protein6944e-071
Q9LU62 Similarity to poly(A)-binding protein II6837e-070
B9ICE3 Predicted protein6641e-067

Arabidopsis top hits (Blast detail)Scoree value
AT5G51120.1 PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding7642e-081
AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein5992e-062
AT5G10350.1 polyadenylate-binding protein family protein / PABP family protein5949e-062
AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein5275e-054
AT2G35410.1 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative1262e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members