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Information for unigene UN76447

FASTA Sequence
Unigene ID: UN76447Length: 861 SSR 
GGAGACCGAATAAACTCTCTCTCGTCTCTCGTCTCTCGTCTCTCGTCAACGGCGGAGAGAAAATGCACGGTCGTCCAAGGAAGGTT
TACAAGCCGGAAGAGGAAGCAGCCTCCGCTGCTAAAGCCGTTAAGTTCCGATCTCTCCAGTCTCAGTTCCTGTCCAACCACCATAA
CAAAATTTATACCAAGGAAGCTATTGACTTGAGTACGAAGCTCTTAGAGATCAACCCGGAGGCGTACACTGCGTGGAACTACCGTA
AGCTCGCCGTTGAAGATACCCTTTCACGACAAGAGTCCGATCCAGACTTGGTCAAGTCAGTTCTCGATGAAGAGCTTAAAGTGGTA
GAAAGTTCTTTGAAGCAGAACGTCAAGTCATACGGTGCTTGGCATCATCGTAAGTGGGTTTTGAGTAAAGGTCATTCCTCCGTAGG
GAACGAGTTACGACTTTTGAATGAGTTCCAGACCCTTGATTCCAGGAACTTTCACGCTTGGAACTATCGCAGGTTCGTTGTGGAGC
TAACCAATAGGTCAAAACATGATGAGTTGAAGTATACAGAGTTTATGATCGGTAACAATATCAGCAACTATTCTGCTTGGCATAAT
CGTAGTGTGCTTCTTTCAAGTTTGCTTGAAAGAAAGCTGACGGGTTCATGCCAAGTCAAAAGATTCCTGAAGAATATGAACTTGTG
CATAATGCTATCTTTACAGACGAGACGTCCAAAGTGGGTGGTTTTATCATCTTTGGCTTCTTGATCAAACCGTTATGTGAGACCCT
CTCTCATTTCTCATGGCTCACATGGTTCCGTATCATCTATCTAGAGCTGGTGCTAACGACTCTCTCTCTCTAGCTCACTACTTTCA
C

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867663 protein binding protein [Arabidopsis lyrata subsp. lyrata]8532e-089
CAB79359 Rab geranylgeranyl transferase like protein (fragment) [Arabidopsis thaliana]8381e-087
NP_194180 RAB geranylgeranyl transferase alpha subunit 1 [Arabidopsis thaliana]8381e-087
CAA23014 Rab geranylgeranyl transferase like protein [Arabidopsis thaliana]8381e-087
CAN68129 hypothetical protein VITISV_043707 [Vitis vinifera]7431e-076

Swiss-Prot top hits (Blast detail)Scoree value
Q00618 Geranylgeranyl transferase type-2 subunit alpha2992e-026
Q9JHK4 Geranylgeranyl transferase type-2 subunit alpha2955e-026
Q5EA80 Geranylgeranyl transferase type-2 subunit alpha2939e-026
Q08602 Geranylgeranyl transferase type-2 subunit alpha2921e-025
Q55DQ4 Geranylgeranyl transferase type-2 subunit alpha2912e-025

TrEMBL top hits (Blast detail)Scoree value
Q8VYB7 Putative Rab geranylgeranyl transferase8389e-088
Q9M0L4 Rab geranylgeranyl transferase like protein (Fragment)8389e-088
Q9SB46 Rab geranylgeranyl transferase like protein (Fragment)8389e-088
A5BNI9 Putative uncharacterized protein7439e-077
B9RJY7 Putative uncharacterized protein7341e-075

Arabidopsis top hits (Blast detail)Scoree value
AT4G24490.1 protein prenyltransferase8385e-090
AT4G24490.2 protein prenyltransferase8385e-090
AT5G41820.1 geranylgeranyl transferase alpha subunit-related / RAB geranylgeranyltransferase alpha subunit-related4031e-039
AT3G59380.1 FTA (FARNESYLTRANSFERASE A); farnesyltranstransferase/ protein heterodimerization/ protein prenyltransferase1729e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members