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Information for unigene UN76472

FASTA Sequence
Unigene ID: UN76472Length: 644 SSR 
TTTTTCATTTAACGCTCTCCCTGCGCAGAAAGAGAGAATAATAATGTATTCGACGAAGCTTCTGGAGAAATTGGAGCTATAAACCT
GGTAAATGGGGAGAGAACCAGAGGACAAACACATGGATAAGAAGCTAAACAGCTCTTCAGGATCTTCGCAGCATATGGAGCCTGCA
GAGGTTAAGGAATGTACTGATGATCACAATGAGGGATCTGGATCCCAATCCCATAGGAAGAAGCTAAACACACCTCCTCAGCCGCA
TAAAACTCGTGGTGGTGTGAATTACACTGTTCCAAAGCCATTCTCTCTGTCGGCTGAAAAGCCTTCTGCTTCCTCCTCCTCAGTCT
GCGCAAGAGCAGGAGGAGTTGATAGTCATAATAATAATAATAACTCACCGGGAAATGCTGTTAGCCGCAACTCTTCTTCTGGTTCA
AGAAGTTCACAGCCAAACTCGCCTATGCCAGCTAGGAAGACAGTAAATCACATGAAGCACCGTGACGACGAAGATACTTTTTCTGT
TGCTTCCTCATCAGCAACATCTGTAAGAACTATTAAACCCAAGGTAACCATTGGAGTTGCTCCTACGTTTAGCAGCACCTCTCGGT
TGGAGAGACGCAAAGAGTTTTACAAGAAGCTAGAGGAGAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM62494 unknown [Arabidopsis thaliana]3646e-033
NP_564659 TPX2 (targeting protein for Xklp2) protein family [Arabidopsis thaliana]3602e-032
XP_002894583 hypothetical protein ARALYDRAFT_337736 [Arabidopsis lyrata subsp. lyrata]3531e-031
CBI35180 unnamed protein product [Vitis vinifera]2867e-024
XP_002267972 PREDICTED: hypothetical protein [Vitis vinifera]2553e-020

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LES4 Putative uncharacterized protein3645e-033
Q9ASW8 At1g54460/F20D21_283601e-032
C6TD61 Putative uncharacterized protein (Fragment)2363e-018
C6TDY8 Putative uncharacterized protein2184e-016
C6TN56 Putative uncharacterized protein2122e-015

Arabidopsis top hits (Blast detail)Scoree value
AT1G54460.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to 375 proteins in 76 species: Archae - 0; Bacteria - 3; Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).3609e-035
AT3G04630.1 WDL11645e-012
AT3G04630.2 WDL11636e-012
AT3G04630.3 WDL11636e-012
AT3G23090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, leaf apex, hypocotyl, flower, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: WDL1 (TAIR:AT3G04630.3); Has 483 Blast hits to 450 proteins in 87 species: Archae - 2; Bacteria - 15; Metazoa - 188; Fungi - 17; Plants - 148; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).1332e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members