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Information for unigene UN76610
| FASTA Sequence |
| Unigene ID: UN76610 | Length: 731 |
SSR | | GGGATGCTTCCGGTGAACAGAACCAACGCTCTGTTAACCATCCTTACTCAAATCAAAGCGCTGCACCATACTCAACAGGTCCACGT
GAAGGTCATAGCTCATGGACTCGAAGAAGAAGTCGTTCTCGGATCCAGTCTCGCTAACTCTTACATCCAATCGAATCGCCTCGATC
TCGCCGCCGCGTCCTTCGATCGAATCCCTCCCCGGAAGAGGAACCGTTACTCCTGGAATACGATCCTCTCCGGTTACTCCAAATCC
AAGAATCACGTTGAAATCTTACGTCTTTACAATCGCATGAGGAAGTACTGTAATGGCGTCGACAGTTTCAATTTGGTGTTCGCGAT
CAAAGCTTGCGTGGGGTTAGGGTTTTTAGAGAACGGGGTTCTGATTCATGGATTAGCGATGAAGTGTGGGTTGGATAAGGATGATT
ACGTTGCTCCGTCGTTGGTCGAGATGTATGCGCAGTTTGGTGGTATGGAAGATGCGCAGAAGGTGTTCGACGAAATGACTCTGAGA
AGTTCGGTTCTTTGGGGGGTTCTGATGAAAGGGTATTTGAGATACTCGAGAGAGAGAGAAGTGTTTCGTTTGTTTTATCTCATGAG
AGAGGCGTGTTTAGGGGTCGATGCGCTTGCGTTGATATGTTTGGTGAAGGCTTGTGGGAATGTCTTTGCTGGTAGAGAAGGGAGTC
AGTGCACGGTTTATCCATCAGAAGGGTTTATAGAACAGAGCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889587 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] | 929 | 3e-098 |
| NP_172104 pentatricopeptide repeat-containing protein [Arabidopsis thaliana] | 906 | 1e-095 |
| XP_002264838 PREDICTED: hypothetical protein [Vitis vinifera] | 472 | 3e-045 |
| CAN75184 hypothetical protein VITISV_001911 [Vitis vinifera] | 435 | 5e-041 |
| XP_002515711 pentatricopeptide repeat-containing protein, putative [Ricinus communis] | 323 | 5e-028 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LND4 Pentatricopeptide repeat-containing protein At1g06140, mitochondrial | 906 | 6e-097 |
| O81767 Pentatricopeptide repeat-containing protein At4g33990 | 275 | 8e-024 |
| Q9SS60 Pentatricopeptide repeat-containing protein At3g03580 | 267 | 7e-023 |
| O80647 Pentatricopeptide repeat-containing protein At2g39620 | 262 | 3e-022 |
| Q9SVA5 Pentatricopeptide repeat-containing protein At4g39530 | 261 | 4e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5C100 Putative uncharacterized protein | 435 | 4e-041 |
| B9RPP2 Pentatricopeptide repeat-containing protein, putative | 323 | 3e-028 |
| B9G2C6 Putative uncharacterized protein | 302 | 9e-026 |
| Q6K297 Os09g0251500 protein | 302 | 9e-026 |
| B9S6P4 Pentatricopeptide repeat-containing protein, putative | 270 | 5e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06140.1 pentatricopeptide (PPR) repeat-containing protein | 906 | 5e-098 |
| AT4G33990.1 EMB2758 (embryo defective 2758) | 275 | 8e-025 |
| AT3G03580.1 pentatricopeptide (PPR) repeat-containing protein | 267 | 7e-024 |
| AT2G39620.1 pentatricopeptide (PPR) repeat-containing protein | 262 | 3e-023 |
| AT4G39530.1 pentatricopeptide (PPR) repeat-containing protein | 261 | 3e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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