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Information for unigene UN76635
| FASTA Sequence |
| Unigene ID: UN76635 | Length: 713 |
SSR | | AACTCAAACAAACAAGCTTTTATTTATTTAACCTCTAGGCTTGTATGTACACATGCCCAGAGAGGGAGAGAGAGAGAGGCCTCTCT
TGTCTTTACACACTAGTTCAATGAGCAGGGTGAGGTAAAGCAGAGTGTGTGTGTGCGCGGTGAGCCTGGAGGATGCAAGCACAATG
AACCGAGGTTAAGTTCAGACAACCACTCATAACAAGTGAATGCCTGCCTGAACAAGTGTGGAGAGCAGGGAAAGTATCGCAAACCG
CTTGAACCGCTGAAGGTGTGAGGTAAGTGCATTGGCTAATGTTAAGGCTTCTCAGTCCTTCTTCATCGAATTTGCCTTTCTTAACC
GATCTCCACAACTCGTGTTTGTTCTTCACTCCGCTCTGAGCCAGCGAGTACATGGCCCTGTCGGTTATGTTTCTGCAGTAGTATAG
CCCCAATGACCTCAAGTGTACACAACGATTCGCTAAAGCCACCACACTCTCATCTGTAATAAGTACACAGCCACAAAGATCAAGGC
TTCTTAGATCAGGACAGCCATCAGCTAAACTCATGACACCATCATCACTTATCTTCTCACACCACCCCAAGTTTAGTGACTGCATT
TGACTACAGTTCTCTCCAATAGCCTGCAATGCATTATCTGATACAGCTTCCACACAACCACAAAGATTCAGAACTTTGAGCTTCCT
GCAAAACCTTGTCAAGTATGCAAGA
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ33955 unnamed protein product [Thellungiella halophila] | 1053 | 1e-112 |
| XP_002887665 hypothetical protein ARALYDRAFT_476863 [Arabidopsis lyrata subsp. lyrata] | 1022 | 4e-109 |
| NP_565147 F-box/LRR-repeat protein 5 [Arabidopsis thaliana] | 986 | 6e-105 |
| NP_564139 F-box protein SKP2A [Arabidopsis thaliana] | 947 | 2e-100 |
| AAM63110 F-box protein AtFBL5 [Arabidopsis thaliana] | 935 | 5e-099 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49286 F-box/LRR-repeat protein 5 | 986 | 3e-106 |
| A6H779 F-box/LRR-repeat protein 2 | 215 | 7e-017 |
| Q8BH16 F-box/LRR-repeat protein 2 | 205 | 1e-015 |
| Q9UKC9 F-box/LRR-repeat protein 2 | 199 | 5e-015 |
| Q5R3Z8 F-box/LRR-repeat protein 2 | 199 | 5e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LPL4 At1g21410/F24J8_17 | 947 | 1e-100 |
| Q8LDN3 F-box protein AtFBL5 | 935 | 3e-099 |
| B9GTP8 Predicted protein | 834 | 2e-087 |
| B9S2N9 F-box/LRR-repeat protein, putative | 830 | 5e-087 |
| B9H7L8 Predicted protein | 809 | 1e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G77000.1 SKP2B; ubiquitin-protein ligase | 990 | 9e-108 |
| AT1G21410.1 SKP2A | 951 | 3e-103 |
| AT5G23340.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box family protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits to 3545 proteins in 210 species: Archae - 0; Bacteria - 454; Metazoa - 4575; Fungi - 774; Plants - 2118; Viruses - 15; Other Eukaryotes - 1159 (source: NCBI BLink). | 233 | 6e-020 |
| AT5G25350.1 EBF2 (EIN3-BINDING F BOX PROTEIN 2); protein binding | 171 | 9e-013 |
| AT3G58530.1 F-box family protein-related | 150 | 2e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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