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Information for unigene UN76645
| FASTA Sequence |
| Unigene ID: UN76645 | Length: 678 |
SSR | | GGCTACCACACGGCTCCTGACCACTTTCTCTTTTCTGTCTCTCCCCAACGCTTCAGCTCTTCGTAGATCCTCCCAGGTGTTGACTT
AAAGCTTGTGAAGATGCTCGTACTGTTTGAGACGCCTGGTGGTTTCGCCCTTTTTAAAGTATTAGACGAAGGAAAGCTTTCTAATG
TTGAGGATTTGGATAGTGTGTTCTCGTCTGCAGATTCAGCTCGAAAGATCTCACGTTCACTAGCTGCATAGCTGCCCTTGCTATCC
GGCGTGATGCTCTTGGTGATAGCGAAGACAACACTATGGGAGTTGAAAGCCGTTTAAAGGTTGAAACACGGTTGAGAAGTCTGGAA
GGGAAAGACATGGGACGTCTGTCTGGTTCAGCTAAAGGCAAACCAAAGATTGAAGTTTATGACAAGGATAAGAAGATTGGATCTGG
AGGTCTGATCACTCCTGCTAAGACTTACAACACTGCTGCAGACTCTCTTCTTGGACAAACTTCCGCAGCTGAGAACGGTGCCAAGG
AGAAGAAAGATAAAAAGAAAAAGAAGAAGGCTGATGATGCAGAGGAAGAAGAAGCCAAAACCGAGGAACCTTCTAAGAAGAAGTCG
AAGAAGAAGAAAACAGAAGCTGAAGCCGAAGAGGCCAAAGCAGACGAACCTTCAAAGAAGAAGAAGAAGAGAAACA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 551 | 2e-054 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 530 | 4e-052 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 486 | 5e-047 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 484 | 9e-047 |
| ADN33903 MAR-binding protein [Cucumis melo subsp. melo] | 382 | 6e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 551 | 7e-056 |
| Q9MAB3 Probable nucleolar protein 5-2 | 484 | 4e-048 |
| A3LUT0 Nucleolar protein 58 | 215 | 7e-017 |
| Q753I4 Nucleolar protein 58 | 201 | 3e-015 |
| Q9QZ86 Nucleolar protein 58 | 192 | 3e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65335 SAR DNA-binding protein-2 | 381 | 5e-035 |
| O65334 SAR DNA-binding protein-1 | 372 | 6e-034 |
| B8APG2 Putative uncharacterized protein | 371 | 8e-034 |
| Q10LH4 Nucleolar protein NOP5, putative, expressed | 371 | 8e-034 |
| A2XGN8 Putative uncharacterized protein | 368 | 2e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27120.1 SAR DNA-binding protein, putative | 551 | 7e-057 |
| AT3G05060.1 SAR DNA-binding protein, putative | 484 | 4e-049 |
| AT5G27140.1 SAR DNA-binding protein, putative | 160 | 2e-011 |
| AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase | 122 | 4e-007 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 111 | 7e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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