Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN76663

FASTA Sequence
Unigene ID: UN76663Length: 645 SSR 
GGACTCAACATATAGTCCACACTTTCCTCTCACGGAGGAGAGAAGACATAGTTTCTTCAATCGGCGCCAGATCCTCCGAGAGAGAG
AGAGTGGCAGATATGATGGAATCGGGGGCTGGTCTCTTGGCGATGGAAGAGAGGATACTACCGGGAAGCTTCTTCCAGTTTCCTCT
TCCTGGATTCAGTGCTTCTCCCAATCGGTTATCTCCTTGTCCTCCTCCCCCTCCTCCCACTGGTCGTGAGAGGTACTTGGCTGAAT
TGCTGCAAGAGAGGCAAAAGTTGGGTCCTTTCTCACAACTTATGCCACATTGCTGCAGACTACTTAATCAAGAAATTCGGAGGATC
TCAAGTTTATCCGACCTTGATAGATATGAGCCTGGCAGTCCATTTAGATCGCCTGCTCTTCTGCCCCCGACTAATGGAAAGCTTGA
TTTTGATGGATGGTCAATGATGCAAGCAGAGGAGAATTTTCATCACCAGAGAGCTTCCCCATTTCGTGCTCCAGTAGGCTGGGGAC
TCCATTCTCCTCCACCCATTGTGAAAAGAGTGATTAGGCTTGATGTGCCTGTCGATCAATTTCCAACCTTCAATTTCGTTGGGCGG
ATTCTCGGCCCGCGTGGGAACTCTCTAAAAGAGTCGAGCTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892515 hypothetical protein ARALYDRAFT_471067 [Arabidopsis lyrata subsp. lyrata]6684e-068
NP_172437 RNA-binding KH domain-containing protein [Arabidopsis thaliana]6622e-067
NP_973800 RNA-binding KH domain-containing protein [Arabidopsis thaliana]6622e-067
AAL31922 At1g09660/F21M12_5 [Arabidopsis thaliana]6585e-067
XP_002263798 PREDICTED: hypothetical protein [Vitis vinifera]4363e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWR3 KH domain-containing protein At1g096606726e-070
Q0WLR1 KH domain-containing protein At4g264752757e-024
Q8GYR4 KH domain-containing protein At3g086202632e-022
Q9FKT4 KH domain-containing protein At5g561402604e-022
Q9ZVI3 KH domain-containing protein At2g386102391e-019

TrEMBL top hits (Blast detail)Scoree value
B9N0F3 Predicted protein4164e-039
B9SKB5 Nucleic acid binding protein, putative4164e-039
B8AYB7 Putative uncharacterized protein3663e-033
Q60DW1 Os05g0419500 protein3663e-033
A2WXQ7 Putative uncharacterized protein3645e-033

Arabidopsis top hits (Blast detail)Scoree value
AT1G09660.1 KH domain-containing quaking protein, putative6726e-071
AT1G09660.2 KH domain-containing quaking protein, putative6726e-071
AT4G26480.1 KH domain-containing protein2756e-025
AT3G08620.1 KH domain-containing protein2632e-023
AT5G56140.1 KH domain-containing protein2604e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members