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Information for unigene UN76839

FASTA Sequence
Unigene ID: UN76839Length: 772 SSR 
GGAATCGAGAGAGAGAGAAAGAGAGAGGAGGAAGAATGAAGAAAGCGGCGGGGAATCTGCTTGGCTCACCTACTTTCGTGGATATA
GGAAACGGACGGCTAAGCTGCGTGGAGACTGGTCACGAAGTTGTAGCCGGAGACGAAGAAGCATACGCTTGTAACAAACGGTGTCG
GTTGGGGCTCATTGATCACGCTCTATCTCATGGGAAATCTCCTCTCAACATGTTCTCGCAGTGCCTAATTTCTCGTTCGAAGCTCG
TGTGCAAGCTTACTGGGGATACTGTGAACAAGAACGAGCAACATATCTGGAAACACGTAAATGGGAATCGAGAGATTTCTACACAA
ATTAGAGCAAGTGGAAAGAGGAACTGGAACAAGCGGAAAGACCGAGGAAACACAAGTAACCAAACACAGACGCGTTAAGGAAGAAA
CTGATTCCGATGAATCAGATTTTTGGATGCTCAAGTCAAGTCCTGGTTCAGAGTCAGAGCATGAGAGTGATGAAGAAAACTGCAAA
GGTTCTCTTTGTGATGCCAAAGAATCTGAAGAGCTCTCAGAAAGAACAAAGAGGATGTCAATAGAGATTGGACCAAGTAGCCTTGC
GTCGAGAAAGAAAAAGATTAGGAATAGTTATGAGTCATGTTAAGAAAAGTTTAGCCCTTCAGTTGCACTTTCACGTGTATTACACA
CACCATCCCACAGAAACATATATATGGAACCAGAACCGTATATCTGAAGAGTAACATCACAAACAACACAGGCATGCACAGAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_198873 Surfeit locus protein 2 [Arabidopsis thaliana]4203e-039
XP_002870691 surfeit locus protein 2 family protein [Arabidopsis lyrata subsp. lyrata]4169e-039
NP_001078686 Surfeit locus protein 2 [Arabidopsis thaliana]4024e-037
XP_002298556 predicted protein [Populus trichocarpa]3641e-032
XP_002521492 conserved hypothetical protein [Ricinus communis]3594e-032

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FM40 Emb|CAB87783.14202e-039
A8MRG2 Uncharacterized protein At5g40570.24023e-037
B9GIK4 Predicted protein3647e-033
B9S673 Putative uncharacterized protein3593e-032
B9DG85 AT5G14440 protein (Fragment)3181e-027

Arabidopsis top hits (Blast detail)Scoree value
AT5G40570.1 surfeit locus protein 2 family protein / SURF2 family protein4201e-041
AT5G40570.2 surfeit locus protein 2 family protein / SURF2 family protein4022e-039
AT5G14440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6533 Blast hits to 4299 proteins in 259 species: Archae - 4; Bacteria - 127; Metazoa - 2727; Fungi - 698; Plants - 260; Viruses - 77; Other Eukaryotes - 2640 (source: NCBI BLink).3189e-030
AT5G14440.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6513 Blast hits to 4273 proteins in 255 species: Archae - 4; Bacteria - 122; Metazoa - 2676; Fungi - 730; Plants - 236; Viruses - 90; Other Eukaryotes - 2655 (source: NCBI BLink).3189e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members