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Information for unigene UN76889
| FASTA Sequence |
| Unigene ID: UN76889 | Length: 853 |
SSR | | CTGTCAACTATAATAAAATTTATTAGTGTCATCTCTTCGTCTTAAAATCACATGCAAAAGGGTCCCGTACCCTTAACTGAGGCCAA
AAAAAAAAAAAAAAAAACTTTTACAAGGTCTTGAAAAGCAAAGAAACAGAGATATGGCTCAGGCTCCGTAGTCTCCCTGATCGAAC
TTGTCTTCAGGGTAGAACACAGCAACCACTTGGTTACCTCCAAACTTCCTACCATTCATCCCGCTTCTTGCCCTCGACGATCCATC
CGTATCACCATACTTCAAGAAACCTTGCCAAGGCCTGCAACTGGCTCACCGCTGGGGCTGGGACGCGGAATCACAACGCTGGTCAA
AGCACCTGCATTTAAAGAGTTAAACAACAAACAAAATCCAAAATACAAGAGAAAACAACAACAACAACAACAAGACACTGTTATTT
CTCTTCTAAGAAAAAAGATAAAAGAGGTCTATGCAGTCAGTCTCCAGTCTGAGTATGTTAGGGGCTCTGATTCTTTTATAACCAAA
GGCAAACTTTCCGCCTTCTTGTCTCATGTCTTCCATGATATCTTCAAACTCCTCGTCGTCTCTAAGCTCATCCTCATTAACAACTT
GAGTCAAACACACAACCGTTGTTGCCACGGGGCCTGGCTGTAACATATTCACCTGAAAAGCAATCTGCTGTTGTGCATGCATCAAT
ACACTCTCTTGTTCAGGTTTCGGCTGCATTGCTTCCTGGTTGGCACGTCTCACGGTAAGTGTCTTATCTCCCATTTTGATGCCGTT
TAGGGCAGCGCACGCAATGTCAGTAACGGCGACTTCTTGGTAGACACAGAAAGCGTATCCTTTGGAGTTGCAGTCTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866997 hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp. lyrata] | 496 | 6e-048 |
| NP_974695 Splicing factor U2af large subunit A [Arabidopsis thaliana] | 494 | 1e-047 |
| BAH19725 AT4G36690 [Arabidopsis thaliana] | 491 | 2e-047 |
| NP_195387 Splicing factor U2af large subunit A [Arabidopsis thaliana] | 475 | 2e-045 |
| NP_849509 Splicing factor U2af large subunit A [Arabidopsis thaliana] | 475 | 2e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23212 Splicing factor U2af large subunit A | 475 | 7e-047 |
| Q8L716 Splicing factor U2af large subunit B | 432 | 7e-042 |
| Q9ZR40 Splicing factor U2af large subunit B | 425 | 4e-041 |
| Q9ZR39 Splicing factor U2af large subunit A | 424 | 6e-041 |
| Q2QZL4 Splicing factor U2af large subunit B | 416 | 5e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DG58 AT4G36690 protein | 491 | 2e-047 |
| A5BUJ8 Putative uncharacterized protein | 454 | 3e-043 |
| B9SGJ4 Splicing factor u2af large subunit, putative | 449 | 1e-042 |
| B9HEU4 Predicted protein | 443 | 6e-042 |
| A9XLD1 Putative uncharacterized protein | 434 | 6e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G36690.3 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding | 494 | 4e-050 |
| AT4G36690.1 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding | 475 | 6e-048 |
| AT4G36690.2 ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding | 475 | 6e-048 |
| AT1G60900.1 U2 snRNP auxiliary factor large subunit, putative | 432 | 6e-043 |
| AT1G60830.1 U2 snRNP auxiliary factor large subunit, putative | 195 | 2e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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