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Information for unigene UN77042
| FASTA Sequence |
| Unigene ID: UN77042 | Length: 498 |
SSR | | GGGGGAGAATGTGCGGCTAAGGAGAATGAGAATCCATGCGGTTTTGAACGAATTTAGTAGAGAGATCAATGTGGCTGATGAAATGC
CCTTCTCTGGCCGCCGCTGCTTCTCTAAAGTCTCTTCCTTTAGCAGACGATCCACACCTTCCTGTAGCCAAAGTCATCCTCTCCAT
AGATCCTCTCGCCTCTGTAGACGATGAAACCAAAGTTGGAATGGAACTAACGCTAACTGAGTTTGGAAACATTCCAAAACGTTATG
CTTTGGATATGTCTAAAGATTTATCCCCATGTTTGTCTTCTGTGAGCCTTCGTCGCAAGGAAAACTGTCAGGAGAAGGGAAGAAGA
TTAAAGGAACTTATGAGCTGAAAGGTTGAGTACAAGAAAGTCCCCCAGGAGGAGTAGGAGGAACTCTCTCTCTCTCTATCTCTCAC
ACAATGTGTCTTTCAGGTTTTGGAGTAATAAATTTTGATTTCTATTCTAAAGGCTAGCGAGTTTGTTT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002877852 hypothetical protein ARALYDRAFT_348323 [Arabidopsis lyrata subsp. lyrata] | 227 | 1e-017 |
| NP_190795 Transcription initiation factor IIF, beta subunit [Arabidopsis thaliana] | 193 | 1e-013 |
| XP_002534300 Transcription initiation factor IIF subunit beta, putative [Ricinus communis] | 177 | 9e-012 |
| NP_001056005 Os05g0509900 [Oryza sativa Japonica Group] | 172 | 3e-011 |
| EEC79507 hypothetical protein OsI_20575 [Oryza sativa Indica Group] | 171 | 4e-011 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T7T1 Transcription initiation factor IIF subunit beta, putative | 177 | 1e-011 |
| Q6L4V9 Os05g0509900 protein | 172 | 4e-011 |
| B8AZT9 Putative uncharacterized protein | 171 | 5e-011 |
| C7IWS5 Os01g0772200 protein | 134 | 1e-006 |
| Q5N8X8 Putative transcription initiation factor IIF beta subunit | 134 | 1e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G52270.1 ATP binding / RNA polymerase II transcription factor | 193 | 1e-015 |
| AT1G75510.1 transcription initiation factor IIF beta subunit (TFIIF-beta) family protein | 128 | 4e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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