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Information for unigene UN77201
| FASTA Sequence |
| Unigene ID: UN77201 | Length: 795 |
SSR | | AGTTGTGTTTTAAAAGTACTTGATGAAACTTGAGTCATGCTGCAATAGCGTACTGCTTATAAATTACAAAACTTTGAAAAAATAAG
AGAGAAAGAGAAGAGAATAGAGAAAGAGAAGCAGACATACAATTCTGATTCTATCTGCCTACTACTACTACTATTCCCAGTGAAAC
GGGAACGTCTGTGGAAGAGCCACAGCCTCATTACCGGATCCATCAGAGACTGCACTCGCATTCTCAAACAATCCGGACCCATAAAA
AACCGTCTCTACTGCTTCTTGGGACAAAGAAAGTGGTGGCTGAAGCAAATGAGGGACTGACGAGGAAGATGATGACAGAAGAGAGA
GAGCGCAATCAGAGTCATGGACGCAACTCGTCATTCTCGAGCAGTCTTCTTCTTCTTGCAAGAAAGGGAACTGTTTCCCTCTACTG
ATTGGAGAAGAAGATACTGGGAACATAATGTCTGTCTTTGCAGACAAGAACCAGCATAGCTCTGGTTCTGCCCGTAACTTGAACCA
TTGGCCATATCTACGCTTACAAGACCGTTTCCCCAGCTCGGACTACCAACAGATGTTGTAGTTGGGAACATATGTGGAGAGCTAGA
AAAATCCAGCAATTTGCTACCTTGGAAGAAAGTTGCATGACGACCGATATGGTCTGGCTGAGGCTTCCGTCTTCTTCTATTGTGTC
CATCAAGACGTTTCCTACAACTTTTCTTTCCTTCATCAAACTCTTCCAAACCATGAAACCTGCTGCATTGTTGACAAAACCTCTGT
TTATGGCCATTGATTGTAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865818 hypothetical protein ARALYDRAFT_918095 [Arabidopsis lyrata subsp. lyrata] | 451 | 8e-043 |
| NP_568731 squamosa promoter-binding-like protein 13 [Arabidopsis thaliana] | 436 | 5e-041 |
| AAM61173 unknown [Arabidopsis thaliana] | 436 | 5e-041 |
| AAM13105 unknown protein [Arabidopsis thaliana] | 409 | 6e-038 |
| XP_002280160 PREDICTED: hypothetical protein [Vitis vinifera] | 331 | 7e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LFW6 Squamosa promoter-binding-like protein 13 | 436 | 2e-042 |
| Q0JGI1 Squamosa promoter-binding-like protein 2 | 238 | 2e-019 |
| Q2R3Y1 Putative squamosa promoter-binding-like protein 19 | 226 | 5e-018 |
| Q6YZE8 Squamosa promoter-binding-like protein 16 | 216 | 7e-017 |
| Q0J0K1 Squamosa promoter-binding-like protein 18 | 214 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DI20 AT5G50570 protein | 436 | 3e-041 |
| Q8RWG6 Putative uncharacterized protein At5g50570 | 409 | 4e-038 |
| A5BME3 Putative uncharacterized protein | 331 | 5e-029 |
| B8Y9B2 Squamosa promoter-binding protein | 300 | 2e-025 |
| B9RAD2 Squamosa promoter-binding protein, putative | 299 | 2e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50570.1 squamosa promoter-binding protein, putative | 436 | 2e-043 |
| AT5G50670.1 squamosa promoter-binding protein, putative | 436 | 2e-043 |
| AT5G50570.2 squamosa promoter-binding protein, putative | 436 | 2e-043 |
| AT3G60030.1 SPL12 (squamosa promoter-binding protein-like 12); transcription factor | 208 | 5e-017 |
| AT1G76580.1 transcription factor | 201 | 3e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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