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Information for unigene UN77288

FASTA Sequence
Unigene ID: UN77288Length: 738 SSR 
CGAACTATTGATTCATTCATCACTCACTACATAATCTTAAAGTAAATGCAGGTTTTCAAATCGGAGCAACACATCAAATGCTTACA
ACAAGATTGTTCATATTTTGCTAAAGTTAAGTCTTGAGATCGTTTATACATGCGCTGTTCAAAAGCTTCATTCCTTCTTCACTCAT
CTGCTGAACCTCTGTTGGCGACAGTATCTTTATGCACCTTACACATCCCACAAACTCCCTGCACCAGTTTGTTTATGCAAGTAAAA
AAATATGGTAAGTCAAAAACTAAGGTGGAGTTAATAGGAAAGTGAGAGAAAGACTTACTCCCATGGATCATCTCCTACAAGAAGAA
CATCACTCTCATAATCAACATATACAAGCTTCCATCCCGAGCTTTGCGGGCGAGTGAGCAGTCCTTCAAGTCCAAACATGCACTCA
ATTGCAGACTTTAGTTCTTCATAGTCCCTGAAGCTTGTGACATCAATTGACCTCCCAACTGACCCGGTTTTTTGGACCTTAGTGTA
AGTTCGGACACGGGGCGTTGCAAGTTTCTGCCATGAGCCTTTACTATTATTCTGCTGCTGCAGCAGACTAGTATCATCAAAATCAA
CATTGCTTGAAGATGTACCACCAGTTCCTCCAGAGTTATCTTGGCGAGACAAGGCCTGTGATTCTGCAAAGCTAGCTGATGTGATC
TGCGACTGCACATCTTGAGCAAAACTGTTATTGTTGTTGTTGTTGTTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34343 unnamed protein product [Thellungiella halophila]6282e-063
XP_002890356 hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp. lyrata]5986e-060
AAG12546 IAA24 [Arabidopsis thaliana]5978e-060
NP_173414 auxin response factor 5 [Arabidopsis thaliana]5978e-060
AAB92476 IAA24 [Arabidopsis thaliana]5978e-060

Swiss-Prot top hits (Blast detail)Scoree value
P93024 Auxin response factor 55974e-061
Q01K26 Auxin response factor 113053e-027
Q8S983 Auxin response factor 113053e-027
A2YAA5 Auxin response factor 162802e-024
A3B9A0 Auxin response factor 162802e-024

TrEMBL top hits (Blast detail)Scoree value
Q8GT89 Hypothetical transcription factor4873e-047
B9R865 Auxin response factor, putative4685e-045
C0PEB3 Putative uncharacterized protein3225e-028
C5Y9Z0 Putative uncharacterized protein Sb06g0319003225e-028
A3AYC7 Putative uncharacterized protein3054e-026

Arabidopsis top hits (Blast detail)Scoree value
AT1G19850.1 MP (MONOPTEROS); transcription factor5974e-062
AT5G20730.1 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator2703e-024
AT5G20730.2 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator2703e-024
AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator2703e-024
AT1G19220.1 ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor2694e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members