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Information for unigene UN77477
| FASTA Sequence |
| Unigene ID: UN77477 | Length: 710 |
SSR | | GGCCTCTTGCCCCCTTCTGACATCCTTCTACTTGACGCAACTTGGAACTAGAAGAACTCTTATGCTGTGGCTTCAGCTGCTGAGAT
AAAACGGAAGTACATGTACCCGAGCTTATTGGTGTTGTTGTTGTCGTGCTAGATGACAGGTCTAGAACATGATGAGGAGCAGAAGA
AGGAATAATTATCTTCTTAGGAGCATGAGCTAAGAAGGAGCTTGTTTCTTTCCTTGATAAAGCTTGCAATGCAGGTGATGCCGACG
CCGATGCAAACCCTGGTCTCCAGCCACCACCACCTGATGTGGATCCTTCATTAGTAGTAGCACGTAACATGTCCGCAAGAGTTGGA
AACTGGCTCGCCTGCTGCTGCTGCTGGACCGCAGTGATCTCAGAATGACAGGAGCCTCCTCCTCCACCTGAAAGACTCAATTCGAG
ATCAAATTCTGGGGAGGGGACCTGCAACTCTTTCATTTTCAGATTATCTGGTTTACGGTTGCCAAGATGGAGGGTAAAGTCCAGCT
CAATATCCATCGAGGACGCCTCCTCCATCTCTTTGGAAGAAGATAATAAACTCATGGAAGCAGCAGTTGCTGAACTCCCTTTGCTA
TTATCAGAAGAGCTTGAGGAGTGACCAAGCGTCAAGGAGAGTAAAGGATCAGCTTCTTGACCCTTCCATTTCCTTTTAGTACCCTT
TGAGGAGTAGACAGGGAGAGGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002886362 hypothetical protein ARALYDRAFT_474940 [Arabidopsis lyrata subsp. lyrata] | 716 | 1e-073 |
| BAD43515 hypothetical protein [Arabidopsis thaliana] | 692 | 8e-071 |
| NP_176596 uncharacterized protein [Arabidopsis thaliana] | 692 | 8e-071 |
| XP_002276602 PREDICTED: hypothetical protein [Vitis vinifera] | 364 | 8e-033 |
| XP_002509888 transcription factor, putative [Ricinus communis] | 346 | 1e-030 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q680W5 Putative uncharacterized protein At1g64140 | 692 | 5e-071 |
| Q9SH64 F22C12.10 | 692 | 5e-071 |
| B9RCK4 Transcription factor, putative | 346 | 7e-031 |
| B9GKB3 Predicted protein (Fragment) | 258 | 1e-020 |
| A2WSR2 Putative uncharacterized protein | 161 | 2e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 2298 Blast hits to 1429 proteins in 121 species: Archae - 0; Bacteria - 42; Metazoa - 1626; Fungi - 29; Plants - 243; Viruses - 9; Other Eukaryotes - 349 (source: NCBI BLink). | 692 | 3e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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