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Information for unigene UN77493
| FASTA Sequence |
| Unigene ID: UN77493 | Length: 696 |
SSR | | AGATCCAGTGAAGTGTTATTAATAAACCAACCATAAACTTCGGGGACTAAACACAAGCTCATAGATTTTTGTTTACTAAAGGGTAG
AACATTCAACCAAATTTGGGAAGCTTATGTACAAACAACCCCAAAAAAAAACACGTTAAGATTTGAACCGTGGTCTCATGACCATA
TCACAAAAGCTTTCGTTGTCTCAGGAAACATGTTTCTTTCTTTCAGTTTGTATCAGTCGATGGGTTGCTGCTGCCTTGTGACGACG
AAAACGAGCTGCTAAACAGCCACGGGATTGATAATTCAATCCCATCACCATCATCGCTCTCCTCCTCTTCTTCTTCTTCTTCTTGC
TCAGTGGGGTGACTGTTCCCACTTCCTTGGCTGCTCGTAAAAAAAGAAAACACACTTCCACCATCGTTACCATTTGGTTCTTCAGT
TCTTGCAAACTCCGTCTTTGTCTCATCCGAAGGTAACTCATACCTACAAACCGGACACGAACAATGAAGCTCAAGCCACGGGAGTA
AACAGTCACCGTGGAACTTGTGCTTACAAGGCATCTCTCTCGCTTCCATCCCAATCACAAAATCATCCAAACAAACAGAACACTGC
AGAGTATCCTCCTCTTGGATTTTGACAGTAGACAAAGACTCAACAGCTTCTTTGAGAGCTGGAGGTGTTCCGTATCTGTTGGGATC
GTTGTCTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADK63410 C3HC4 type zinc finger protein [Brassica rapa] | 589 | 6e-059 |
| XP_002894508 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 512 | 5e-050 |
| NP_564693 RING/U-box domain-containing protein [Arabidopsis thaliana] | 499 | 2e-048 |
| XP_002523395 zinc finger protein, putative [Ricinus communis] | 412 | 2e-038 |
| XP_002303979 predicted protein [Populus trichocarpa] | 410 | 4e-038 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0II22 RING finger protein 126 | 234 | 4e-019 |
| Q9BV68 RING finger protein 126 | 231 | 1e-018 |
| Q91YL2 RING finger protein 126 | 224 | 6e-018 |
| Q7T0Q3 RING finger protein 126-A | 223 | 8e-018 |
| Q6DIP3 RING finger protein 126 | 222 | 1e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVU8 At1g55530/T5A14_7 | 499 | 1e-048 |
| B9SBM6 Zinc finger protein, putative | 412 | 1e-038 |
| B9GXX2 Predicted protein (Fragment) | 410 | 3e-038 |
| B9GLB5 Predicted protein (Fragment) | 403 | 2e-037 |
| Q6NMJ8 At3g13430 | 350 | 2e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 500 | 6e-051 |
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 382 | 3e-037 |
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 350 | 1e-033 |
| AT3G13430.2 zinc finger (C3HC4-type RING finger) family protein | 350 | 1e-033 |
| AT4G26400.2 zinc finger (C3HC4-type RING finger) family protein | 304 | 3e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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