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Information for unigene UN77552
| FASTA Sequence |
| Unigene ID: UN77552 | Length: 531 |
SSR | | GGGACCAGAACCAGAAGAGGAGACATAACATAGATAGAAGAGAGAGAGAGATAGAGAGTGTGTGATTCTGCGGAAGAGCTTCATTG
TAGGGTTCATCGTTATTAACAAACAAAACATGGGTGCAGGTGGAAGAATGCAAGTCTCTCCTCCTCCCAAGCCCTCCGAAACCAAC
AACACCCTCAAACGCGTCCCCTGCGAGACACCACCCTTCACACTAGGAGACCTCAAGAAAGCAATCCCACCTCACTGCTTCAAACG
CTCCATCCCACGCTCCTTCTCCTACCTTCTCTCCGACATCATCATCTCCACCTCCCTCTACTACCTCGCCACAACTTACTTCCCCC
TCCTCCCTCACCCTCTCTCTTACCTCGCCTGGCCTCTCTACTGGATCTGCCAAGGCTGCGTCCTAACAGGCCTCTGGGTCATCGCC
CACGAATGCGGCCACCACGCCTTCAGCGACCACCAGTGGCTAGACAACGCCGTCGGCCTCGTCTTCCACTCTTTCCTCCTCGTCCC
TTACTTCTCCTGGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACP39506 delta-12 oleate desaturase [Brassica napus] | 681 | 7e-070 |
| CAD30827 fatty acid desaturase 2 [Brassica rapa] | 669 | 2e-068 |
| AAD19742 delta-12 desaturase [Brassica carinata] | 669 | 2e-068 |
| ACP39504 delta-12 oleate desaturase [Brassica napus] | 669 | 2e-068 |
| AAF78778 delta-12 oleate desaturase [Brassica napus] | 668 | 2e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39287 Omega-6 fatty acid desaturase, endoplasmic reticulum | 660 | 1e-068 |
| P46313 Omega-6 fatty acid desaturase, endoplasmic reticulum | 624 | 2e-064 |
| P48631 Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 | 474 | 4e-047 |
| P48630 Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 | 452 | 1e-044 |
| O81931 Delta(12) fatty acid dehydrogenase | 449 | 3e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C3W522 Delta-12 oleate desaturase | 681 | 5e-070 |
| C3W519 Delta-12 oleate desaturase | 669 | 1e-068 |
| C3W520 Delta-12 oleate desaturase | 669 | 1e-068 |
| Q8LPE8 Fatty acid desaturase 2 | 669 | 1e-068 |
| Q9ZPI2 Delta-12 desaturase | 669 | 1e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12120.1 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | 624 | 2e-065 |
| AT3G12120.2 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | 624 | 2e-065 |
| AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 262 | 1e-023 |
| AT2G29980.2 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 262 | 1e-023 |
| AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | 238 | 9e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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