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Information for unigene UN77673
| FASTA Sequence |
| Unigene ID: UN77673 | Length: 696 |
SSR | | GGTCTCCTCGCCGACAAAAAAAGTTCTCTATTGCTTTCCTTCCTTCCTCCGTCAATCTTATCACCGGCCGTCTTTATCCCTCCGAT
CACATTCAAACCGTGACTGCTCTCGATTTCATTGGCCGTAGTTTATTTGACCTCGGGGAAAGACCTTTGAAGTATCAATGTAATGG
AAAGTGAGAGATTGATCAGTTGCTGCGGGAGATAATAATAATAATAATAATACAATACAAAAGATGTCATGGATGAAAGGCAAATC
ATCTGGTTGGACTGCCTTTGATCTCAAGCAGAGACAAAGACAAGGTCACCAAAGCGAGATTAAGGATGATCCATTCCCGCCTGTTT
CGACTAGTGTTAATAATCCACCACCCTTAGATGTAATGAGAGGAAAGCTGGTCAGAAGAAATCACGAACCTTCTGAAAAGTCTTTC
TCTTCCGTTCTCTTACCTCCTCCGAAGTTTCCAGCACTGACAGAGAGTAAGGATAGCAGAAGCAAGCCTAGCCCTTTGTTGGCTCC
AACGAGTCATCACGATTCATCGGCCTTCATCAAGCTGCAGGAGATGAACAGCTGGGCTGATGATAGCTTGATAAAGGATATATTGT
TATCCACAGAAGATAATTTTGAGATGGCCTTAGCTTTTTTGCAAGGAATGGTTTCTACTGATCACTCAGCAATCAAAGTGACATCA
AGAAGCTG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002874133 hypothetical protein ARALYDRAFT_910364 [Arabidopsis lyrata subsp. lyrata] | 501 | 1e-048 |
| NP_197743 smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana] | 495 | 5e-048 |
| ABN05922 Smr protein/MutS2 C-terminal [Medicago truncatula] | 242 | 1e-018 |
| CAN81330 hypothetical protein VITISV_039334 [Vitis vinifera] | 166 | 7e-010 |
| XP_002267329 PREDICTED: hypothetical protein [Vitis vinifera] | 166 | 7e-010 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LT11 Genomic DNA, chromosome 5, P1 clone:MQM1 | 495 | 3e-048 |
| A2Q1V5 Smr protein/MutS2 C-terminal | 242 | 8e-019 |
| A5BPB7 Putative uncharacterized protein | 166 | 5e-010 |
| C6TDW9 Putative uncharacterized protein | 147 | 8e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23520.1 LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Smr protein/MutS2 C-terminal (InterPro:IPR002625), Region of unknown function DUF1771 (InterPro:IPR013899); Has 91 Blast hits to 91 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 45; Plants - 27; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | 495 | 2e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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