Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN77677

FASTA Sequence
Unigene ID: UN77677Length: 777 SSR 
AGGGGAAAGGAAAAATAAATAAATAAAATTAACAAAAAACGTTCAGTCTATCTCTCTCTCTCTCTCTTTTGATACGTTGTGAGATC
GCCATGAATCCTGAGTATGACTATCTGTTCAAGCTTTTGCTTATCGGTGACTCTGGTGTTGGAAAATCATGTTTGCTTCTAAGATT
TGCTGATGATTCTTACCTGGATAGCTACATCAGTACCATTGGTGTTGACTTTAAAATCCGTACAGTCGAACAGGACGGAAAGACAA
TCAAACTCCAGATCTGGGACACAGCTGGTCAAGAACGTTTCAGGACTATCACCAGCAGCTACTACAGAGGAGCTCATGGCATCATT
GTCACCTATGATGTCACTGACCAAGAGAGCTTCAACAACGTTAAGCAATGGCTTAATGAAATCGACCGTTACGCTAGTGAGAATGT
GAACAAGCTACTCGTTGGGAACAAAAACGATCTCACTTCACAGAAGGTTGTATCCACTGAGACAGCTCAGGCTTTTGCAGATGAAC
TTGGGATCCCTTTCTTGGAAACAAGTGCTAAAAATGCAACCAATGTTGAAGAAGCTTTCATGGCCATGACTGCTGCTATTAAGACC
AGAATGGCTAGCCAACCATCCGGAAGTGCCAAACCACCGACGTCCAGATTCGCGGACAGCCGGTGACCAGCAATCAGCTGTTGCTC
ATCTTGATCCATAGTCTCAAAGTCTTTTTATCATACACATATATCATTTGTTTCATGCATGTGACTTTCAGTGTGACACTCAGTGA
TCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD64935 GTP-binding protein, putative [Brassica oleracea]9429e-100
NP_568678 RAB GTPase-1A [Arabidopsis thaliana]9293e-098
NP_193486 RAB GTPase homolog 1C [Arabidopsis thaliana]9177e-097
ABD65068 GTP-binding protein, putative [Brassica oleracea]9169e-097
AAL31108 AT4g17530/dl4800c [Arabidopsis thaliana]9142e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q05737 GTP-binding protein YPTM28628e-092
P28188 Ras-related protein RABD2A8332e-088
P40392 Ras-related protein RIC18198e-087
Q39571 GTP-binding protein YPTC18152e-086
P31584 GTP-binding protein yptV18053e-085

TrEMBL top hits (Blast detail)Scoree value
Q2A9V7 GTP-binding protein, putative9426e-100
Q9FPJ4 AT5g472009292e-098
Q9SEH3 AT4g17530/dl4800c9175e-097
Q2A9H3 GTP-binding protein, putative9167e-097
Q8W4S8 AT4g17530/dl4800c9141e-096

Arabidopsis top hits (Blast detail)Scoree value
AT5G47200.1 ATRAB1A; GTP binding9301e-100
AT4G17530.1 ATRAB1C; GTP binding9182e-099
AT1G02130.1 ARA-5 (ARABIDOPSIS RAS 5); GTP binding8332e-089
AT3G11730.1 ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding7426e-079
AT5G03520.1 ATRAB8C; GTP binding5983e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members