Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN77678

FASTA Sequence
Unigene ID: UN77678Length: 555 SSR 
GCAAGTACCGCGAGGTAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTACTTGACTGAGTTTATGTCCACTAGACTCGGTG
TCAAGCGGGAGTCCAACATCCTTACAACTTCCTCCAGAGTTGCAGATGATGGTAAACTCTACTACCAAGTCGAGGTGAATATAAAG
TCATACGCAAACAACAACGAGCTGGCAGTGATGCCGCAAGATAGAGTGGCGCGTTTGGAATGGGACAGGCGCTACCTGGCGGTTCT
AGGAGTTGAGAACAATAGTCTCTACTCACTGAGACTCCAAACTCCTGAGAAAGTTTTCCTGGAAGAGGAGAAAGATCTAAGAAGAG
TCATGGAATCCTTCAGGGTCGAGAAGATTTAGAGAGAGAGAGAAGCTCACGTTTCTTTTTTCTTAAAAAAAAAAGAAAAGATTGTT
CTTCATACCCATTGTATTATTATTTTTGGTAATATTGAAAGGCTTTAAGCTAAGCCAAAGGCTAAAGGCAGTTTTGTTGTAATGCC
TTGTCTACAATTTTTGGTTCATCATGTCATATTTGCTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567468 PsbP domain-containing protein 1 [Arabidopsis thaliana]5151e-050
NP_001031646 PsbP domain-containing protein 1 [Arabidopsis thaliana]5151e-050
XP_002870234 photosystem II reaction center PsbP family protein [Arabidopsis lyrata subsp. lyrata]5142e-050
AAM61572 unknown [Arabidopsis thaliana]5123e-050
XP_002330072 predicted protein [Populus trichocarpa]4944e-048

Swiss-Prot top hits (Blast detail)Scoree value
O23403 PsbP domain-containing protein 1, chloroplastic5157e-052

TrEMBL top hits (Blast detail)Scoree value
B9N469 Predicted protein (Fragment)4943e-048
B9RFL8 Thylakoid lumenal 21.5 kDa protein, chloroplast, putative4908e-048
A9PDI9 Predicted protein4891e-047
B6SS34 Putative uncharacterized protein4729e-046
B8A2C8 Putative uncharacterized protein4729e-046

Arabidopsis top hits (Blast detail)Scoree value
AT4G15510.1 photosystem II reaction center PsbP family protein5166e-053
AT4G15510.3 photosystem II reaction center PsbP family protein5166e-053
AT4G15510.2 photosystem II reaction center PsbP family protein1851e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members