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Information for unigene UN77690
| FASTA Sequence |
| Unigene ID: UN77690 | Length: 612 |
SSR | | GGATTTTCTCGAGAAATCATTTCAAACTCGTTTCGATTCATCCCACAAAACTTCGGTACCGACCGATCCGTTCTGATTCCACCTGC
GAGAGAATTCAAAAACAGCAAAGTTTTTTTTTCCTTCGTCTAAGCTTTGATCAAACTCATGGGTACTTCTCAGAGCCGTGAAGATC
GGATCAACGATTCCGACACCGAATCCGATTCTGATTACTACCAAGAAGAAGAAGAAGATGACGATGATCAGAAGAAGAAGAAGCAA
GGATCGTCTTCTGGTTCGAAACCTTCTTCCGATTCATCATCGATTCTCGAGATCGAGAAGAAGCTGAGCGCCTTGAAGCTCAAATA
CCCATCGCCATCCTCGCCCCCCAACGCGGTGAAGCTTTACCGCCACATCGGAGGAAAACACCCCCAAGGCGAAATGGATCACCGCG
GAGAAACTCACATCCTACAAATTCGTCAAAACGACGTCGTCCGAGGGAGACGATGTCGTTGATTACGACGACGGCGAAGAGACAAA
CGAGAAAGGCGAGTCCTTTTGGTTTCTCGGCGTCGGTGGTTCCAAGGTCAGAGCTAGGGTTTCCACCGATATGCAGTTGAAGATGT
TTGCTGACCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883169 hypothetical protein ARALYDRAFT_479439 [Arabidopsis lyrata subsp. lyrata] | 276 | 9e-023 |
| NP_188555 Vacuolar import/degradation, Vid27-related protein [Arabidopsis thaliana] | 275 | 1e-022 |
| XP_002284732 PREDICTED: hypothetical protein [Vitis vinifera] | 198 | 1e-013 |
| CAN82150 hypothetical protein VITISV_043502 [Vitis vinifera] | 197 | 1e-013 |
| AAQ90245 DEM2 [Solanum lycopersicum] | 186 | 2e-012 |
| Swiss-Prot top hits | Score | e value |
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| No hits found | | |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G19240.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), Vacuolar import and degradation, Vid27-related (InterPro:IPR013863); BEST Arabidopsis thaliana protein match is: dem protein-related / defective embryo and meristems protein-related (TAIR:AT4G33400.1); Has 206 Blast hits to 202 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | 275 | 6e-025 |
| AT4G33400.1 dem protein-related / defective embryo and meristems protein-related | 178 | 1e-013 |
| AT5G16500.1 protein kinase family protein | 113 | 4e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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