 |
Information for unigene UN77701
| FASTA Sequence |
| Unigene ID: UN77701 | Length: 733 |
SSR | | GGGTGGTTGGGTTGTTTCGTTTCCATCCACTCTTTCTCTCTCGTTTGTTTCTTTCTCCAGCCCTTCGCCAGACCAACAAGGAGGGA
GGACAACAAAAGCTGAGCTTTTTTTTTGGGGGGTTTAATCAATCAAAGAAGAACAGATTTGAATTTTTATTGGGTCTTCAGAGAAG
AAGAAGCAGAGACATTTAAAAAGGAGGGAAGACAATGGAGGAAACAATGGCGGCTAGGTATTGGTGTCACATGTGTTCACAGATGG
TGAACCCCACAATGGAATCCGAGATCAAATGCCCCTTTTGCCAAAGCGGATTCGTCGAAGAAATGAGCGGTAACGGTAACGGTAAC
GGAGGCTTAAGAGACGTTCAAGACCCAGAAACGGAGTTCGGAACAACAGACCGTGCCATGTCTCTATGGGCACCAATCTTGCTCGG
GATGATGAGCAGTCCTCGTAGACGAAGAAGGTTCAGAAGAGCAGAGTTCGGTTCAGAAGAAGAAGACAACGAAGACGATGTTCTTG
ATCGTCATCATCATCATCATAGAGCTAGGCGTCACGGTGGAGAGATTGATTTGGACAGAGAGTTCGAATCTATCTTGAGGAGAAGA
AGGAGAAGCTCGGGGAATATACTGCAGCTGCTTCAATGGATCCGTGCAGGGATTGCTTCTGAGTACGAGAGCTCTGATAACAACGA
GAGAGTTATAATGATCAATCCTTATAACCAGTCCCTCGTTGTGAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200445 RING/U-box domain-containing protein [Arabidopsis thaliana] | 722 | 3e-074 |
| XP_002864451 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 709 | 8e-073 |
| NP_194370 RING/U-box domain-containing protein [Arabidopsis thaliana] | 582 | 5e-058 |
| XP_002285765 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 469 | 6e-045 |
| XP_002862493 hypothetical protein ARALYDRAFT_359584 [Arabidopsis lyrata subsp. lyrata] | 435 | 5e-041 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD7 | 722 | 2e-074 |
| Q8L5Z3 AT4G26400 protein | 582 | 3e-058 |
| O65594 Putative uncharacterized protein AT4g26400 | 509 | 9e-050 |
| B9GXX2 Predicted protein (Fragment) | 432 | 8e-041 |
| B9SBM6 Zinc finger protein, putative | 358 | 3e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 722 | 1e-076 |
| AT4G26400.2 zinc finger (C3HC4-type RING finger) family protein | 582 | 2e-060 |
| AT4G26400.1 zinc finger (C3HC4-type RING finger) family protein | 582 | 2e-060 |
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 192 | 3e-015 |
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 156 | 5e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
