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Information for unigene UN77807
| FASTA Sequence |
| Unigene ID: UN77807 | Length: 635 |
SSR | | GGCCAATCGCCGGCGGCAGAAAATGGGGAAGAAGAACAAGAGAAATCACGACGACCCTGAGCTCGAAATGGAGCCCGAGCTAACTG
AAAGAATCGACGACGGAGACCTCAAGAAGAAGACTAAGAAGAAGAAGAGAAGCCATGATGATCCGGAGCAAAAGGTGAGTCTCGAC
GGAGACGCGAAGAAGAAGAAGAAAAAGAAGAAGAAAAGCAAGGACGAGGAGGAGGAGGAGAAGCCAAATGGTGAAGAAAAGAAAAA
CGAAGGAGGCAGACCAACTGTTACTATAGCCATAGCTGGCTCCATCATTAACAACACTCAATCACTCGAGCTCGCCACACGTCTTG
CTGGCCAAATAGCTCGTGCATCCACTATTTTTCGAATTGACGAGATTGTAGTGTTCGACAATAAGAGCAGCTCAGAGATCAACAAC
AACTCTGATAGCAACAACGAAAGTGGTGCCCCCTTTCTCGTTCGTATCTTGAAGTATTTAGAGACGCCACAGTATCTGAGGAAGAC
TCTCTTCCCCAAGCACAATGATCTTAGATTTGTGGGTATGTTGCCACCTCTTGATGCTCCTCACCATTTGCGTAAGCACGAGTGGG
AACAATACCGTGAAAGGTGTGACACCGAGGGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871878 hypothetical protein ARALYDRAFT_909964 [Arabidopsis lyrata subsp. lyrata] | 754 | 4e-078 |
| NP_197431 uncharacterized protein [Arabidopsis thaliana] | 692 | 6e-071 |
| XP_002517202 Protein C9orf114, putative [Ricinus communis] | 519 | 7e-051 |
| XP_002311607 predicted protein [Populus trichocarpa] | 511 | 6e-050 |
| XP_002436686 hypothetical protein SORBIDRAFT_10g007030 [Sorghum bicolor] | 503 | 5e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3UHX9 Uncharacterized protein C9orf114 homolog | 341 | 1e-031 |
| Q5T280 Uncharacterized protein C9orf114 | 331 | 2e-030 |
| Q10950 Uncharacterized protein B0361.6 | 170 | 1e-011 |
| P36044 Protein MNN4 | 128 | 7e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6NLH7 At5g19300 | 692 | 4e-071 |
| B9RTY3 Protein C9orf114, putative | 519 | 5e-051 |
| B9HJU9 Predicted protein | 511 | 4e-050 |
| C5Z6G0 Putative uncharacterized protein Sb10g007030 | 503 | 3e-049 |
| D5A9B4 Putative uncharacterized protein | 490 | 1e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19300.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 4766 Blast hits to 2044 proteins in 217 species: Archae - 72; Bacteria - 102; Metazoa - 2264; Fungi - 372; Plants - 195; Viruses - 4; Other Eukaryotes - 1757 (source: NCBI BLink). | 729 | 1e-077 |
| AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase | 131 | 3e-008 |
| AT5G41020.1 myb family transcription factor | 124 | 2e-007 |
| AT5G65900.1 DEAD/DEAH box helicase, putative | 115 | 2e-006 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 114 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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