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Information for unigene UN77859
| FASTA Sequence |
| Unigene ID: UN77859 | Length: 718 |
SSR | | GGCTATGCCGACATAACACTCACTCTCACTATCGACGCGAGCCTTCTCAGCGAACCACCAGACTCCAACACAAAGTTTGTTTTCTT
TTTAATTAAATTATCGCTCGGAATTGTTATTTTTAGTTTTAAAAAGGTCATCCGCGCCATCATTTCATTTTATCAATCATCGATCT
CTCTCGAAAACCCTAATTTCCCGAAGAAAGAGTGAGAGAGAGAGAGAGAGAGGAAGAATAAGAAGAAGATGCCGAGAGAAATAATG
ACGCTGCAAGTGGGACAATGCGGGAACCAGATCGGGATGGAGTTCTGGAAACAGCTGTGCCTGGAGCACGGCATCAGTAAAGACGG
TATCCTCGAGGACTTCGCTACTCAGGGAGGAGATAGAAAAGATGTGTTTTTTTACCAAGCGGATGATCAACACTATATCCCACGAG
CTTTACTCATCGATTTGGAGCCTAGAGTTATCAATGGTATTCAGAATGGGGACTACCGGAACCTCTACAACCACGAGAACATCTTC
GTTGCTGACCACGGTGGTGGTGCTGGTAACAACTGGGCCAGTGGCTATCACCAAGGGAAAGGGGTTGAAGAGGAAATAATGGACAT
GATTGATCGAGAAGCTGATGGAAGTGACAGCCTTGAGGGTTTTGTTCTTTGCCACTCCATTGCTGGTGGCACTGGCTCAGTATGGG
GTCTTATCTCTTGGGGACTTTGAATGATCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191724 tubulin gamma-1 chain [Arabidopsis thaliana] | 797 | 5e-083 |
| NP_196181 tubulin gamma-2 chain [Arabidopsis thaliana] | 787 | 7e-082 |
| XP_002871173 gamma-tubulin [Arabidopsis lyrata subsp. lyrata] | 787 | 7e-082 |
| XP_002532658 tubulin gamma chain, putative [Ricinus communis] | 781 | 4e-081 |
| XP_002320847 tubulin gamma-1 chain, at3g61650-like protein [Populus trichocarpa] | 778 | 8e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P38557 Tubulin gamma-1 chain | 797 | 2e-084 |
| P38558 Tubulin gamma-2 chain | 787 | 4e-083 |
| Q9XFG3 Tubulin gamma chain | 762 | 3e-080 |
| P34785 Tubulin gamma chain | 759 | 6e-080 |
| O49068 Tubulin gamma-2 chain | 749 | 9e-079 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T339 Tubulin gamma chain, putative | 781 | 3e-081 |
| B9I8U5 Tubulin gamma-1 chain, at3g61650-like protein | 778 | 6e-081 |
| A5BTA6 Putative uncharacterized protein | 777 | 7e-081 |
| Q8GZT0 Gamma-tubulin | 773 | 2e-080 |
| B9GQG6 Tubulin gamma-2 chain | 769 | 6e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G61650.1 TUBG1 (GAMMA-TUBULIN); GTP binding / GTPase/ structural molecule | 797 | 2e-085 |
| AT5G05620.1 GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2); GTP binding / GTPase/ structural molecule | 787 | 3e-084 |
| AT5G44340.1 TUB4; structural constituent of cytoskeleton | 332 | 2e-031 |
| AT1G75780.1 TUB1; GTP binding / GTPase/ structural molecule | 324 | 2e-030 |
| AT5G23860.1 TUB8; structural constituent of cytoskeleton | 324 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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