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Information for unigene UN77918

FASTA Sequence
Unigene ID: UN77918Length: 694 SSR 
GGATTCTCAGACCCCTCTCTCTCTCTCTAAAACGACAATGATTTCAGGTTCTATCCCTACTGATCTGATCACCGAGATACTGTGGA
GGTTACCAGCAAAATCCATCGCTAGGTTTCGTTCCGTATCGAAGCAATGGGCATCAATAATCGACCATCCAAAGTTCAAACACTCG
TACCTGACCAAGTCCTCCTCTCATCCTCGTCTCTTATTCGCCATCGAAGAGAAAGGTCTCTGGAGCATCTTCTCTTCACCTCAGCA
TCTGAGTCCACACGACGACAAGGCTTCTTCATCTTCATCGTCTCTTGCCGCCGAGTTTCATATGAAGTTCCCTCCAGGCCGTATGC
GGATCTTCCGTCGCGACGATCGACAGTTCGCGTGCGGCTACGCCTCCGGTTTGATCTATTTCTACGGTATGTGTACCGGTTTCGAG
CGCAAAGACGAAGTGCCTGTGGTATGTAACCCTAAAACAGGACGTTACGAGACGATGCCTTTTATCTCACGGTACAGGAAGTCTTA
CAGCTTTTTCGGGTTCGATCCTGTCGGGAAGCAGTACAAGGTGCTTCACATGGCTTATCCGTGCGGTCCCGACGACCACAGGGTTA
TGACGCTAGGAGCTAGAAGAGCTAGGTGGAGAAAGGTCGACTGCTCGTTGAGACTTGAACATATGAGCGAAAGGGTGTGCATTAAC
GGAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894041 hypothetical protein ARALYDRAFT_473884 [Arabidopsis lyrata subsp. lyrata]7142e-073
NP_175167 F-box protein [Arabidopsis thaliana]6919e-071
AAG11425 Hypothetical protein [Arabidopsis thaliana]6919e-071
AAO41958 unknown protein [Arabidopsis thaliana]6821e-069
XP_002894039 hypothetical protein ARALYDRAFT_891508 [Arabidopsis lyrata subsp. lyrata]5977e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q0V7S0 F-box protein At1g473406914e-072
Q1KS79 F-box protein At2g231605518e-056
Q9SIV7 F-box protein At2g164505401e-054
Q9ZQF0 F-box protein At2g156405293e-053
Q9FX02 Putative F-box protein At1g473004934e-049

TrEMBL top hits (Blast detail)Scoree value
A0MEH8 Putative uncharacterized protein (Fragment)4651e-044
O64711 Putative uncharacterized protein4651e-044
Q9FX06 T3F24.4 protein4506e-043
A0MEL9 Putative uncharacterized protein (Fragment)3342e-029
Q6ICX6 At3g575802122e-015

Arabidopsis top hits (Blast detail)Scoree value
AT1G47340.1 F-box family protein6914e-073
AT2G23160.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated type 3 (InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G16450.1); Has 750 Blast hits to 732 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 750; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5517e-057
AT2G16450.1 F-box family protein5401e-055
AT2G15640.1 F-box family protein5293e-054
AT1G47300.1 F-box family protein4934e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members