 |
Information for unigene UN77983
| FASTA Sequence |
| Unigene ID: UN77983 | Length: 596 |
SSR | | CCTAGACCAACATTTTTTTCATTACATGCATTTATTTTGGTTTGTGTACAAAAAAAAAGACTTCTTCCCTCTATGTGTAATAATAA
TAATAACAGCTTGTTGTGTTGTTTTCAATTTTTAAGACATTGATTTTCTCCACCTAGAAGGTGTTCTTCCTTTGACAAGCCTTGTC
TTCATATTCCCTGGAGTCTGAGGTTCGAACCCTTCACCATTCTCACAGTTCCTCATCTCTTCAACGCTAACACTTCCTCTGATAGA
AGGCGCTAACCCTAGCCTCTTCCACCTGAAAAACCCTTTACTCCCACCACTCTTCTTCTCCAAAAGCCTCTCAACCTGCAAATGCA
TTGCACTGCACTCGCTCTGCAGCCTCGCCACATCCTCTCTGAGCCTCTTTATCTCTGCTTGCTGAACATTCATCTCGCATTTGGAC
AAGCACCTCGCTCCTCCTGCAAAGCCTTGCTCAAAGTAATGTGGGCCGGAAGGGTTTGTTGTTGGACTCCTTGTTGTGCTGCTTAT
CAAGCTACCGCTCCAATCAACGTGACGGCTTAGCTTTGTCTGCTCGGTGAACAACACTCTGATGATTGCTCTCACCGGTA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885094 phototropic-responsive NPH3 family protein [Arabidopsis lyrata subsp. lyrata] | 631 | 6e-064 |
| NP_188176 Phototropic-responsive NPH3 family protein [Arabidopsis thaliana] | 600 | 2e-060 |
| AAM61364 non-phototropic hypocotyl protein, putative [Arabidopsis thaliana] | 600 | 2e-060 |
| NP_175686 phototropic-responsive NPH3-like protein [Arabidopsis thaliana] | 430 | 1e-040 |
| XP_002891715 phototropic-responsive NPH3 family protein [Arabidopsis lyrata subsp. lyrata] | 411 | 2e-038 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LFK3 Non-phototropic hypocotyl protein, putative | 600 | 2e-060 |
| Q9LRP8 Non-phototropic hypocotyl-like protein | 600 | 2e-060 |
| Q9C941 At1g52770 | 430 | 8e-041 |
| B9RUY5 Signal transducer, putative | 300 | 1e-025 |
| B9GWP2 Predicted protein (Fragment) | 253 | 3e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G15570.1 phototropic-responsive NPH3 family protein | 601 | 9e-063 |
| AT1G52770.1 phototropic-responsive NPH3 family protein | 431 | 5e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
