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Information for unigene UN78084

FASTA Sequence
Unigene ID: UN78084Length: 714 SSR 
GAAGTTCATTGAATTTTCTTTTCAATGGGTTCATTCGAAAACTAGAATGCATATCATTCAGTGCATGATCCAAAATAAATAAAAAG
AGAGCAGAAACATACTATTATGCCTACTAGGCTACTATTATCTTCTACAAAACGAAGAAAAAAAAGAGAAGAGACCATTATCACAA
GTCACGAATCAGAAGTAATAGCCAATTAGTCGTCCTCACTTTCACTGGATGATGATGATGATGATGATGATGGCGACAACGTTGTA
GAAGATGAAAAAGAAGATGTCGAAAATGAAGAAGATAACGAAAGTGATGGTGACCTAAAATATGCCACAAATGTGAGACCTGGTCT
TTCTTCTCTCAGCTCTTCGAGAGGAAACTTTGGTTTGCTACATCTCCTGCCTTCATTAATTAAACCGTGGTCATTTGAAACGTCAA
TGTGTCGAATGAATCTGAAGTTTGTTTTGGACATGTGTAACGAATCCAAAAAATTGCAAACCGTTTTCTTCTCTAGAGAATCGCAA
TCTCGCAATATTAGAGTCTCTAGCAGTGAGCCTCTGAAGTCATTGCTGAAATGCCTCAAAAAGCGACCAGTGATACTATGTGTCCT
GGATATGTTGAGATACTTGAGTTTAGCCAAACCCTTAAAAGATGGTATGTTTTCATGTCACCTAGATCGAAACCTATAAGTGATAG
TGAAGTTAAATAGGGGCAGTTTCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAD42970 unnamed protein product [Arabidopsis thaliana]2582e-020
NP_192183 F-box protein SKIP17 [Arabidopsis thaliana]2582e-020
XP_002872816 hypothetical protein ARALYDRAFT_490282 [Arabidopsis lyrata subsp. lyrata]2545e-020
XP_002862153 predicted protein [Arabidopsis lyrata subsp. lyrata]2536e-020
NP_001190662 F-box protein [Arabidopsis thaliana]2501e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q0WRC9 F-box protein SKIP172588e-022
Q9SY03 F-box protein At4g027602311e-018

TrEMBL top hits (Blast detail)Scoree value
A5BK27 Putative uncharacterized protein2176e-016

Arabidopsis top hits (Blast detail)Scoree value
AT4G02740.1 CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02760.2); Has 1691 Blast hits to 1200 proteins in 170 species: Archae - 2; Bacteria - 109; Metazoa - 687; Fungi - 197; Plants - 199; Viruses - 23; Other Eukaryotes - 474 (source: NCBI BLink).2587e-023
AT4G02760.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02740.1); Has 3231 Blast hits to 948 proteins in 145 species: Archae - 0; Bacteria - 50; Metazoa - 1253; Fungi - 344; Plants - 69; Viruses - 27; Other Eukaryotes - 1488 (source: NCBI BLink).2311e-019
AT4G02760.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02740.1); Has 3231 Blast hits to 948 proteins in 145 species: Archae - 0; Bacteria - 50; Metazoa - 1253; Fungi - 344; Plants - 69; Viruses - 27; Other Eukaryotes - 1488 (source: NCBI BLink).2311e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members