Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN78128

FASTA Sequence
Unigene ID: UN78128Length: 286 SSR 
GAAACTCATCTCATGTGTTGCGTGTGTGTGTGTGTTCTCTCAAGGTTTGAGAGCAAGTGAAAGACCAAACCTTGGATGCTTGTCTA
AGGCCCTAGTGTCGATCTCACTGGAAACGGTCACTAGCGATTTGGGCAAAACCTCGTGCTGCAAAAAAGCACCGAGGGTGCCACGG
CTGTTGAATTTAACTTTCACCGAAGTCCAGGGATCAATCGCGTATGACCCACCAACAGTTATCGTGTTCTCATTAATCCAGAATTT
CCTGTAAACCTCACCAACTGCAGCACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866701 hypothetical protein ARALYDRAFT_496845 [Arabidopsis lyrata subsp. lyrata]3321e-029
NP_201551 voltage dependent anion channel 2 [Arabidopsis thaliana]3293e-029
NP_001190641 voltage dependent anion channel 2 [Arabidopsis thaliana]3293e-029
AAW22622 porin-like protein [Brassica napus]3096e-027
XP_002877711 hypothetical protein ARALYDRAFT_323570 [Arabidopsis lyrata subsp. lyrata]3061e-026

Swiss-Prot top hits (Blast detail)Scoree value
P42055 Mitochondrial outer membrane protein porin of 34 kDa2133e-017
P42056 Mitochondrial outer membrane protein porin of 36 kDa2043e-016
P42054 Outer plastidial membrane protein porin2017e-016
Q9SRH5 Mitochondrial outer membrane protein porin 11972e-015
Q9SMX3 Mitochondrial outer membrane protein porin 21963e-015

TrEMBL top hits (Blast detail)Scoree value
Q9FJX3 At5g675003292e-029
Q5MD14 Porin-like protein3094e-027
A5AQ65 Putative uncharacterized protein2988e-026
C6TAH8 Putative uncharacterized protein2933e-025
B9H6N6 Porin/voltage-dependent anion-selective channel protein2862e-024

Arabidopsis top hits (Blast detail)Scoree value
AT5G67500.1 VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel3306e-032
AT3G49920.1 VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5); voltage-gated anion channel2751e-025
AT3G01280.1 VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel1981e-016
AT5G15090.1 VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel1972e-016
AT5G57490.1 VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel1693e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members