Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN78187

FASTA Sequence
Unigene ID: UN78187Length: 728 SSR 
GGATACGTAAGAGTTCCACCAATTCATTCTCTCTCTCTCTCTCATCGCACGGTGAAACCCGAGAACCGGCCCCCACCGTCGGTCAT
CGCCTCCACACAGATGTTCTCTTGAAAAACCTCTCTCCTTCTCCTACCCTCTTCCTTTAAACGCCAGCTTATTATTACTCAAACAA
CAACAAGATCTGTTTTTTCCCACGGTTAGATAGAGAGGGAGGATGTCGACACCAGCAAGGAAGAGGTTGATGAGGGATTTCAAGAG
GTTGTAGCAAGACCCACCTGCGGGTATAAGCGGTGCTCCACAGGACAATAACATCATGCTCTGGAACGCTGTCATATTCGGGCCTG
ATGACACACCATGGGATGGAGGTACTTTCAAACTCTCACTGCAGTTCTCTGAAGATTATCCTAATAAACCTCCAACAGTTCGTTTT
GTGTCACGGATGTTCCATCCAAACATTTATGCAGATGGGAGTATTTGCTTGGACATTCTGCAAAACCAGTGGAGCCCTATATATGA
TGTTGCTGCTATACTTACCTCCATCCAGTCGTTGCTCTGTGACCCTAATCCTAATTCTCCTGCAAACTCGGAAGCCGCTCGGATGT
ACAGCGAAAGCAAGCGTGAGTACAACAGAAGAGTGCGCGATGTTGTTGAGCAAAGCTGGACTGCTGACTAGTTGTGTTGTTTGTTT
GTTGTAATCTTTGTACTCTCTCCTACTCTCAAAATGTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563951 ubiquitin-conjugating enzyme E2 1 [Arabidopsis thaliana]8083e-084
NP_565289 ubiquitin-conjugating enzyme E2 A [Arabidopsis thaliana]8002e-083
CBI32005 unnamed protein product [Vitis vinifera]7959e-083
ABC01903 ubiquitin carrier-like protein [Solanum tuberosum]7932e-082
P35130 RecName: Full=Ubiquitin-conjugating enzyme E2 2; AltName: Full=Ubiquitin carrier protein 2; AltName: Full=Ubiquitin-conjugating enzyme E2-17 kDa 2; AltName: Full=Ubiquitin-protein ligase 27922e-082

Swiss-Prot top hits (Blast detail)Scoree value
P25865 Ubiquitin-conjugating enzyme E2 18081e-085
P42745 Ubiquitin-conjugating enzyme E2 28001e-084
P35130 Ubiquitin-conjugating enzyme E2 27929e-084
P25866 Ubiquitin-conjugating enzyme E2 27812e-082
P42746 Ubiquitin-conjugating enzyme E2 36961e-072

TrEMBL top hits (Blast detail)Scoree value
A0T2P5 Ubiquitin carrier protein8002e-083
Q2PYX5 Ubiquitin carrier protein7931e-082
B7FGK6 Ubiquitin carrier protein7921e-082
A9PD36 Ubiquitin carrier protein7912e-082
A9NMK1 Ubiquitin carrier protein7902e-082

Arabidopsis top hits (Blast detail)Scoree value
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase8099e-087
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase8099e-087
AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase8018e-086
AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 3); ubiquitin-protein ligase6961e-073
AT4G27960.1 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase3545e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members